| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0100 |
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| Symbol | |
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| ID | 9154234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 106398 |
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| End bp | 107978 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | anibiotic ABC transporter efflux pump |
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| Protein accession | YP_003645093 |
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| Protein GI | 296137850 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.995514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGGGC TCGGTGCCAC TCTGCGGCTG GTGGTCCGGC GTGACCGGGT TCAACTGGTG
GTGTGGCTGC TGCTGTACGT GGCGATGGCC GCATCGGCCT ACTCCACCGC CAAGGTCAAT
TACGGCGATC AGGCCGCGCT CGAGTCCGCG GCCCGCGCGG CGAGCGAGAA CCCCTCTCTG
GTCGCGATGT TCGGCCCCGT CTATTCGGCC ACCGTCGGTG CTGTCGGCAT GATCAAGATG
GTCGTGATGA TGGCGGCCGC TCTGGGCCTG CTCACCGGCC TGCTGGTGAT CCGGCACACC
CGCGCCGACG AGGAGTCCGG TCGCCGGGAG ATGTTGGGCG CCTCCGCGAT CGATCGGATC
GCGCCGCCAC TGGCCGCACT GATCGAGTCG GTCGGGCTGA GTCTGGCCAT CGGCGCGGTG
AGCGCGCTCG TCCTGATCGG GATGGGCGCC GACGCACCGG GCAGTGTCGC CTTCGGGGCA
CTGTGGGCGC TGACCGGCAT CGTCTTCGCC GGGTTCGCGC TGCTGTGCGC ACAACTGACC
GAAGGCGCCC GGGCCGCGCG CGGGTTGTTC GCCGTCGGCC TCGGTGGTGC GTACCTGCTG
CGCGCCGTGG GCGATGTGTC TGTGCTCCGT ATCGATGGCA CGCTGCCCGC GGAACCCGGC
TGGGAGTCCT GGCTTTCGCC GCTCGGCTGG TCACAGCAGA TCCGGCCCTT CGCCGACGAC
CGGTGGTGGC CCGCACTCCC CCTGGTGGTA CTCACCGTGG TGTTCGCCGC CGCGGCGCTG
CGGATCGCCG CGCGCCGCGA CCTCGGCGCC GGACTGATCC CCGTGGGCCG CGGCCGGAGC
CACGCCGGAC CGCTGCTCGG TTCCGTGGAG GCGCTCACCT GGCGGCTGCA CCGCGGCCAG
GTGATCGGAT GGACCGTGGG CATGCTCGCC GTGGGCGCGG CGTTCGGCGG GATGGGCTCG
GCGATCGACT CGCTCGCCGG GAACGAGGGC ACCCGGGAGA TGCTGGAACG ACTGGGGGGT
TCCGGCTCGA ACCTGCTCGA CATCTTCTTC GGCGCGGAGT TCTCGGTGAT GGGCATGGCG
ACCGCCGCGC TCGGCATCTC GATCGTCAAC ACCGCCTGTT CCGAGGAGCT CTCGGGCCGC
GCCGAATACC TCCTATCGGC ACCCGTGCTG CGGCTGCGCT GGTACGTCTC ACACCTGACG
GTGGCAGTGA TCGCGACCTT CGTCGCGACC CTCGCCCTGG GCATCGGAGT CTCACTCACG
GCCGGCCGCG AGCTGATCGG ACCGGCCCTC GGCGCCCTGC CTGCGGTCTG GGTGATCACC
GCGATCGCCG CCCTGGCGGG TGCGATTCAC GCCCAATGGT CGGCGGTCGG ATGGGTGGCC
CTGGCGCTGT GCGTGGTGAT GATGGTGGCC GACGTGTTAC GGCTGCCCGA CTGGGTGTCG
ACGTTGTCGC CGTTCACCCA CGTGGCCACT CAGCCCGGTG CCGCGCTGGT GACCGGGGCG
ACCGTGACAT TGGTGGCGAT CTCCGCGGTG GGCCTGATCG CCGCCGCCAC CGCCGAATCC
CGGCGCGATC TGGCCGCCTA G
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| Protein sequence | MTGLGATLRL VVRRDRVQLV VWLLLYVAMA ASAYSTAKVN YGDQAALESA ARAASENPSL
VAMFGPVYSA TVGAVGMIKM VVMMAAALGL LTGLLVIRHT RADEESGRRE MLGASAIDRI
APPLAALIES VGLSLAIGAV SALVLIGMGA DAPGSVAFGA LWALTGIVFA GFALLCAQLT
EGARAARGLF AVGLGGAYLL RAVGDVSVLR IDGTLPAEPG WESWLSPLGW SQQIRPFADD
RWWPALPLVV LTVVFAAAAL RIAARRDLGA GLIPVGRGRS HAGPLLGSVE ALTWRLHRGQ
VIGWTVGMLA VGAAFGGMGS AIDSLAGNEG TREMLERLGG SGSNLLDIFF GAEFSVMGMA
TAALGISIVN TACSEELSGR AEYLLSAPVL RLRWYVSHLT VAVIATFVAT LALGIGVSLT
AGRELIGPAL GALPAVWVIT AIAALAGAIH AQWSAVGWVA LALCVVMMVA DVLRLPDWVS
TLSPFTHVAT QPGAALVTGA TVTLVAISAV GLIAAATAES RRDLAA
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