| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_4038 |
|---|
| Symbol | |
|---|
| ID | 9140758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 5181188 |
|---|
| End bp | 5181565 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | Rhodanese domain protein |
|---|
| Protein accession | YP_003632048 |
|---|
| Protein GI | 296124270 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.686364 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCACA ACCCGCGATT TTTGCAACTG GTGGAATCGG TTCGTACCAA TATCCGGGAA
TGCAGTATTG CCGACCTGAA ATTACTGCTC GAAAAGAAAT CGCCCGTCCT GCTCTTTGAC
GTGCGTGAAG ATCACGAATG GGTCAATGGC CATATTCCGA CAGCGAAGCA TCTGGGCCGG
GGCATTATCG AACGGGATAT TGAAACGTTG ATCCCTGATC CGGAAACCGA AATTTACCTG
TATTGCGGCG GTGGCTTTCG CTCAGCTCTG GCAGCCGACA CGCTGCAGAA AATGGGCTAC
ATGCATGTGA TCTCGGTGGA TGGTGGCTTC CGTGGCTGGA AAGAATCTGG GGGTGAGATT
GTCACCCCCA GTGCATAG
|
|---|
| Protein sequence | MQHNPRFLQL VESVRTNIRE CSIADLKLLL EKKSPVLLFD VREDHEWVNG HIPTAKHLGR
GIIERDIETL IPDPETEIYL YCGGGFRSAL AADTLQKMGY MHVISVDGGF RGWKESGGEI
VTPSA
|
|---|
| |