Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3733 |
Symbol | |
ID | 9140451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 4796575 |
End bp | 4799385 |
Gene Length | 2811 bp |
Protein Length | 936 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | leucyl-tRNA synthetase |
Protein accession | YP_003631744 |
Protein GI | 296123966 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0244486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCGTT ATGACGCCGC CCGCATTGAA CCCAAATGGC AGGCCTATTG GGACCAGCAT GCCACTTTCC GTACGGAAAT GGATGTTTCC AAGCCCAAAA TGTATGTCCT CGACATGTTC CCTTATCCTT CGGGAGATGG GCTGCATGTG GGACATCCCG AAGGATACAC AGCGACCGAT ATCACCTGCC GGTTTGCCCG CATGCGGGGG AAAAATGTGC TCCACCCCAT GGGCTGGGAT GCGTTTGGTC TGCCGGCTGA GCAGTATGCC GTCGAAACGG GGACGCATCC CCGGATCACC ACCGAAAAGA ACATTGCCAC CTTCAAGCGG CAACTCAAGA GCCTGGGCTT CAGCTACGAC TGGGAACGCG AACTCGCCAC GACCGATCCG GATTACGTCC GCTGGACGCA GTGGATCTTT CTCCAGCTCT TTGACACCTG GTATGATGAA ACCTGCGAGT GGACAGGTCC GGATGGCCAG GTGCGAACCG GTCGCGGCCG CCCGATCAGC GAATTGCCCA TCCCTTTAGA AGTGAAGGCC CAGGGAGAGC CGGCTGTCCG CAAATATCAG GATGCGCATC GACTGGCCTA CATTCATGAA GCACCGGTCA ACTGGTGCCC CGCTTTAGGA ACAGTGCTCG CCAACGAAGA AGTGACCGCC GACGGCAAGA GCGACCGGGG GAATCATCCC GTCGAGCGGC GAAACCTCAA GCAGTGGATG CTGCGGATTA CGGCTTATGC CGAGCGCTTG ATTGGGGAAC TTGATCAGGT CAACTGGCCT GAGTCGATCA AGCTGCTGCA AAGGAACTGG ATTGGTCGCA GCGAAGGAGC GGAAGTTGAT TTTGTGATTG ACCCGGCCAG CTGGCGCGGG AAATCGGCCG CTGGTGAGGA AAAGCTCCGG GTCTATACCA CCCGGCCCGA TACGCTCTTC GGGGCGACGT ACATGGTGCT GGCCCCCGAA CATCCGCTGG TCGATGCGAT CACCAGGGAA GATCGAGTGG CCGATGTGGC GGCTTACCGC CAGAAGACCT CTCTCAAGAG CGACCTCGAC CGAACCGATC TCGCCAAGGA GAAATCGGGC GTCTTCACCG GCGGCTACGC CATCAACCCC GTCAACGGCG AGAAGATCCC CATTTGGATC GCCGACTATG TCCTCATGAG TTACGGCACC GGCGCGATCA TGGCCGTCCC CGCGCATGAC GAACGCGACC TCGAATTTGC CACCTTGTTT GGTATTCCGG TGATTCCTGT GGTTTCTCCG CCTGAGGCAC CTGGTGAAGG CTTGATTGGC TTCACGGGTG CCGGGATTGC GGTCAATTCC GGGCCTTACT CAGGCCTTAC AACAGATGAG GTGAAGGCGC AGATCGTCGC TGATCTGGCG GCCAAGGGCG TCGCCAAGAA GGCGGTCAAC TATCGTCTTC GCGACTGGCT GTTCAGTCGT CAGCGTTATT GGGGGGAGCC ATTCCCCATC TGGCACGAAC TGGATGCTCA AGGCGAGCCT ACGGGGATGG TGCGGGCGGT CAGCGCGAGC GAGCTGCCGG TGAAGCTCCC CGAGATGGAA GACTTCAAGC CGACCGGCAC GCCTGAACCG CTGCTTTCGA AAGCCCCTGC CGAGTGGCTC TACGCGACAG CAGCCGATGG TACGAAACTG AAGCGGGAAA CGAACAGCAT GCCTCAGTGG GCGGGGAGCT GCTGGTACTA CCTGCGCTTC TGCGACAACA AGAACAGCGA GCGGTTTATC GATCCCGAGA AGGAGAAGTA CTGGCTGCCG GTTGACCTCT ACATTGGTGG TGCGGAGCAT GCGGTGCTGC ATCTGCTCTA TTCGCGATTC TGGCACAAGG TGCTCTTTGA TCGCGGGCAT GTGACCCATG CCGAGCCATT CCAGCGACTG GTGAATCAGG GGATGATTCT CGGCGATTTA GAATTCGTCG CCTTTCAGAA CCCGACAGGT GAGTTCGTCA CGGCGAAGGG GACCGATGTC AATCGCTATA TTGACGCCCA GGGGCAAACC GTTATCCCTG TGAAGCTCAA GGCGGACGAT GTCGAGAAGC AGGGGGACAG TTTTGTCCTC AAGAGCGATC CGCAGATTGT GGTCGATGCC CGTTCGTTCA AAATGTCGAA AGCCCGGCGA AACGTGATCA ATCCCGATCA GGTTGTCGAG CAATATGGAG CCGATTCGCT GCGGTTGTAT GAGATGTTCA TGGGGCCGCT GGAAGCGACC AAGCCGTGGA GCATGTCGGG TGTCGAAGGG ATTTATCGCT TCCTGGGCCG TGTGTGGCGA CTGATTGTCG ATGATCAGCT TGACCAGGTC GTGCTGAACT CGAAGGTGCA GCCTGTCGAG CCGAGCCCTG CACAGAATCG GATCTTGCAC AAGACGATCA AGGCGGTGAC AGACGACATC GAGCGGCTGT CGTTCAATAC CGCCATCAGC CGCATGATGG AGTTTGTGAA CGAGTTCACT GCTGCTGACG TGCGGCCCAA AATCGCGATG GAAAAGTTCG TGCTGCTCAT CTCGCCCATG GCGCCACATC TGGCGGAAGA GTTGTGGGAA GTGCTGGGGC ATGAGAAATC GCTGGCCTAT GAGCCCTGGC CAGAGTTCGA TGAGACGTTA CTGGAAGAAG CCACGATCGA AATCCCCGTG CAGGTGAATG GCAAGGTTCG CGGCAAGATC ACGATTGCCA AGGACGCCAC GGCAGAAGTC GTAGAAGCGG CAGCCGCAAG CGACCCGCAC GTGAGCAGTC AGTTGGAAGG GAAGACGATT GTGAAGAAGG TCTATGTCCC AGGCCGGATG ATGAATTTCG TGGTGAAATA A
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Protein sequence | MPRYDAARIE PKWQAYWDQH ATFRTEMDVS KPKMYVLDMF PYPSGDGLHV GHPEGYTATD ITCRFARMRG KNVLHPMGWD AFGLPAEQYA VETGTHPRIT TEKNIATFKR QLKSLGFSYD WERELATTDP DYVRWTQWIF LQLFDTWYDE TCEWTGPDGQ VRTGRGRPIS ELPIPLEVKA QGEPAVRKYQ DAHRLAYIHE APVNWCPALG TVLANEEVTA DGKSDRGNHP VERRNLKQWM LRITAYAERL IGELDQVNWP ESIKLLQRNW IGRSEGAEVD FVIDPASWRG KSAAGEEKLR VYTTRPDTLF GATYMVLAPE HPLVDAITRE DRVADVAAYR QKTSLKSDLD RTDLAKEKSG VFTGGYAINP VNGEKIPIWI ADYVLMSYGT GAIMAVPAHD ERDLEFATLF GIPVIPVVSP PEAPGEGLIG FTGAGIAVNS GPYSGLTTDE VKAQIVADLA AKGVAKKAVN YRLRDWLFSR QRYWGEPFPI WHELDAQGEP TGMVRAVSAS ELPVKLPEME DFKPTGTPEP LLSKAPAEWL YATAADGTKL KRETNSMPQW AGSCWYYLRF CDNKNSERFI DPEKEKYWLP VDLYIGGAEH AVLHLLYSRF WHKVLFDRGH VTHAEPFQRL VNQGMILGDL EFVAFQNPTG EFVTAKGTDV NRYIDAQGQT VIPVKLKADD VEKQGDSFVL KSDPQIVVDA RSFKMSKARR NVINPDQVVE QYGADSLRLY EMFMGPLEAT KPWSMSGVEG IYRFLGRVWR LIVDDQLDQV VLNSKVQPVE PSPAQNRILH KTIKAVTDDI ERLSFNTAIS RMMEFVNEFT AADVRPKIAM EKFVLLISPM APHLAEELWE VLGHEKSLAY EPWPEFDETL LEEATIEIPV QVNGKVRGKI TIAKDATAEV VEAAAASDPH VSSQLEGKTI VKKVYVPGRM MNFVVK
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