Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3702 |
Symbol | |
ID | 9140420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 4762301 |
End bp | 4763242 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_003631713 |
Protein GI | 296123935 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.909161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAAAC GACGTGAATT CATTGCGACC ACAACGCTGG GTGCCGGACT ATCCGCTGCA ACCGCACTCT CCTGCCAGCC TGCCCAGGCG GCGATCGAGC AGGGGCGACC GTTTCGCTAT TGTCTCAATA CGAGCACGAT ACGTGGCCAG AAGCTGCCCA TCGTCGAAGA GATCAAGCTC GTTGGCGATG CGGGATACGA TGGGATCGAG CCCTGGATTA ACGAAATCGA TGCTTACCAG CAGCAGGGTG GCTCACTCCC TGATCTTTCG AAGCGCATTG CAGATGCAGG CCTGACGGTC GAGAGTGCCA TTGGGTTTGC CGCCTTTTTA GTCGACGACC CGGCTCAGCG GCAGAAGGGG CTGGATGAAG CCCGCCGGTG CATGAGGCTG GTGAAGGCGT TGGGGGGATC GAGAATTGCC GCCCCTCCTG TGGGTGTGAC CGATCGAACC GATATGAATC TGGATGTGCT GGCCGAGCGG TTTGCCGCAC TTGTGCAAGT AGGGCGCGAA GAAGGCGTGT GGCCACAACT CGAACTTTGG GGCTTCTCGA AAACGTTGCA TAAGCTGGGC GAAGTCGCTT ATCTGCTGGC CCAGTGCGGC GATGTCAATG CCCTGGCTCT CTTGGATGCC TATCACATTT ACAAAGGTGG CTCCGAATTC GGTGGCCTGG GAGCCTTTGC AGGGAACCGC ATGCAGTGCT TCCACATCAA TGATTATCCG GCCGAACCAC CACGCTCGGA AATCAAAGAC GAACATCGTG TTTATCCCGG CGATGGCATC TGCCCGCTGA CTGAAGTTCT CACGATTCTC AAAAACAGCG GGTTTCGGGG TGCGATATCG CTCGAACTTT TTAATCGCAG CTATTGGCAG TTGCCAGCCG ATCAGGTGGT GAAGACCGGT CTGGAAAAGA TGAAGGCCGT TGTGGCCAAA GCCGGTTTGT AG
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Protein sequence | MLKRREFIAT TTLGAGLSAA TALSCQPAQA AIEQGRPFRY CLNTSTIRGQ KLPIVEEIKL VGDAGYDGIE PWINEIDAYQ QQGGSLPDLS KRIADAGLTV ESAIGFAAFL VDDPAQRQKG LDEARRCMRL VKALGGSRIA APPVGVTDRT DMNLDVLAER FAALVQVGRE EGVWPQLELW GFSKTLHKLG EVAYLLAQCG DVNALALLDA YHIYKGGSEF GGLGAFAGNR MQCFHINDYP AEPPRSEIKD EHRVYPGDGI CPLTEVLTIL KNSGFRGAIS LELFNRSYWQ LPADQVVKTG LEKMKAVVAK AGL
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