Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2915 |
Symbol | |
ID | 9139627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 3771553 |
End bp | 3773457 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | protein of unknown function DUF116 |
Protein accession | YP_003630936 |
Protein GI | 296123158 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAACAGA TACCTATGTC GATGACTTCT ACGCCGGCAT CACAAGTTAT TGTTCCCGTT GAGGAGCATC CCGAAGCCGA TAAGCCCAAA CGCCGGAGCA CGGCCCAATT CAAGTTCGTT CCGGAGACGC TCGCGCATCG CGAGAAGATC CGCTCTGATG CGGTGGCTTT TGGAAAGACA CTGGATCGCT CGAAGCCATT CACCCGCAAT CAACTGGAAG CGATGGCGCG GGAGATGCTG GCCACGCATG GTGAGCCCGA GAAGTTTCTC GGCTTTGCGA TGGTGATGCT GGGGAATGTC TTCTGGCGCG AACAGTTTCT GGCCATTCCT TTTGAGCGGC GGATGCTGCT GTTGCCCCAC TGCTTGAAGC ATGCCGAAGG TTGTCCGGCC GACTATGACG AGTTTGGTCT GGATTGCGAG CGCTGCGGTG CCTGTTCGAT TGCAGATTAC AAGGTGAAAG CCGAACAGCT GGGCTACAAA GTCCTGGTGG CTGAAGGCTC GCCGATTGTG CTGAAGATTA TCGTCTCCGG GCATATCGAT GGCATTCTGG GAGTGGCCTG CCTGAATGTG CTGGAGAAGG CGATCGACAA GGTGCTGATT GCCGGCGTCC CTTCGTATGC GGTGCCGCTG CATTCGGGTG ATTGTAAAAA TACGACGCTC GATGAATCGT GGGTCTGGGA ATGTCTCGAT AAGTATGAGC CATTGCCCGA TCATAAAACT CGCAGCTTTG TGCCTTTGAT GCGGGCCTCG AACCGGGCCT TTGATGAGCA TTTCGAAACG CTGACTCAAC CCATTCGCAC GGATGCACTC AAAGGTGATC GAGTGAAAGC AGCTGGCGGA GCTGACACTC AGGATCAATT GTCACCACTC AAGTTTACGG AGACGGTGGT GCTCGACTGG TTGCAGCATG GGGGCAAGCG GCTGCGGCCT TTTATCACCC TGGCTGCCTA CGATGCCCTC ACGGGTGCTG CCGGGCTGAC GGCTGATCAT CAGGATCAGG CCCTCGAATA CCCACCGGCT GTCAATCGTG TGGCCATGGC CATCGAAGCT TTTCATAAAG CCTCGCTGAT ACACGATGAT ATTCAGGACA ACGACCAGTT CCGTTATGGC AAGGAAACTT TGCACAGGCA GTATGGTGTC GGGCCGGCCA TTAATCTGGG TGATCATTTG ATTGGGGCAG GTTATCGACT GGTTTCTGCC TCACGAAAAG AGCTGGGTGC TGAAGTCGCT GCCGATATTC TCGATGCGTT TTCGGCAGCT CATATGAAGC TGTGCGAAGG GCAGGGAGCT GAGTTACAGT GGTCACGTTC TGGCCGACAT GATCTGACTC CTGCTGAAGC GATGAAGATC TATGCGCTGA AGACCTCGCC GGCGTTCGAA GCGGCACTGT ATGCCGGCAT TCGCATGGCG GGGCCGGTGG ATGACTACGC CGAAATGATC ACACAATTTT CGCGTCATTT AGGTGTGGCC TTCCAGATTC TGAATGATCT GAGTGACTGG CTGGGTGATG ATCACAACAA GCTGGTGGCT GGTCAGGATG CTCAGTCCAT GCGACCGACG CTCTTGTGGG CCATGGCCTG GGAAGCGGCG GCGCCTGCTG ATCGCGAAGA GTTGCTGCGC GTGGCCAGTT CGACTTACAG CCCGCATGCG AAATTCGAAG CCTTCAAGCG GGTTTTTGAA AAGCTGGGGA TCTTTACCAA AGCTCAGACG TTGGTCGAAA AATCGCGAGC CCGGGTGGAA ACTCTGGCCG ACAGTGTCCA TCCCGATCCG TTGCGGGAGC TGCTCTATTT CGTGATCGAT ACCGTCCTCT CGGAAGAGCA TCTGCCTGCC GCACCGGCAC CGGTGGTTGT TTCGATGGAG ACTGTGCGTA AACCCGTCCT CCATCAATTG CAGGTCAATG CCTGA
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Protein sequence | MKQIPMSMTS TPASQVIVPV EEHPEADKPK RRSTAQFKFV PETLAHREKI RSDAVAFGKT LDRSKPFTRN QLEAMAREML ATHGEPEKFL GFAMVMLGNV FWREQFLAIP FERRMLLLPH CLKHAEGCPA DYDEFGLDCE RCGACSIADY KVKAEQLGYK VLVAEGSPIV LKIIVSGHID GILGVACLNV LEKAIDKVLI AGVPSYAVPL HSGDCKNTTL DESWVWECLD KYEPLPDHKT RSFVPLMRAS NRAFDEHFET LTQPIRTDAL KGDRVKAAGG ADTQDQLSPL KFTETVVLDW LQHGGKRLRP FITLAAYDAL TGAAGLTADH QDQALEYPPA VNRVAMAIEA FHKASLIHDD IQDNDQFRYG KETLHRQYGV GPAINLGDHL IGAGYRLVSA SRKELGAEVA ADILDAFSAA HMKLCEGQGA ELQWSRSGRH DLTPAEAMKI YALKTSPAFE AALYAGIRMA GPVDDYAEMI TQFSRHLGVA FQILNDLSDW LGDDHNKLVA GQDAQSMRPT LLWAMAWEAA APADREELLR VASSTYSPHA KFEAFKRVFE KLGIFTKAQT LVEKSRARVE TLADSVHPDP LRELLYFVID TVLSEEHLPA APAPVVVSME TVRKPVLHQL QVNA
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