| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2485 |
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| Symbol | |
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| ID | 9139196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 3240028 |
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| End bp | 3242364 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | Protein of unknown function DUF1588 |
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| Protein accession | YP_003630510 |
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| Protein GI | 296122732 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.474006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCACA CCTCCAAGTT CTGGTTTTTG AAGAACCTCA CCGTCTGTGT GGTGCTCCTC
GGCTGTCCCT GGATGAATTC CTCTGTCTCT GGTGAGGAAG ACCCGCATCA GGCAGCGAAA
GTTCGTGGAC AGGCTCTCTT TGCCCAGAAG TGTGCCAGTT GCCACGGTGC GGCTGGCCAA
GGAGGAACCG ATAGCTACAA GACGCCATTG ATCGGTGATG CCTCAATTGT CGAGTTGACC
CGCATCATCG ATGCCACCAT GCCCGAAGGT GAGCCCGAAC AACTCGACAA AGCTCAATCC
GAAGATGTGG CTCGATACAT CTACGACGCC TTCTATTCTC CCGATGCCCA GATTCGAAAT
TCCCCCTCCC GCATCGAACT TTCCCGCCTT ACGGTCAGGC AATACCAGCA GGCAGTGACC
GATTTGCTCG GCAGTTTTCG TGGAGGCTAC GAGAACACCA ACGAGTTCGG CTTGAAAGCG
ACCTATTTTG ATGGGCGTCG CTTCCGTAAA GAAGACAAAA AGCTCGAACG GATTGATCCA
GTCGTGCAGT TTGATTTTGG TGAAGGGAAG CCACTGCCAG ATGTCGAAAT GGCCAGCGAT
GAATTCTCGA TTCACTGGAC GGGCTCACTC ATTGCGCCGG AAACTGGCGA ATACGAAATC
ATCATCAAGA CTGCCAATGG TGTGGAATTC TGGCTCAATG ATGAATCAAA AATTCTCATC
GATGGCCGAG TTCGCTCAGG GAACGATGTC GAATGGCGCG AGCGAATCAA CCTGCTCGGT
GGCCGCAGGT ATCGACTGCG CCTGCAGATG TTCAAATCGA AAAATGCCAA AGAAAAGACC
GCTGCGATTG CCCTGTGGTG GCGACCACCC CACAAAACGG AAGAGCTGAT CCCTACGCGT
TATCTGCTCC CTGCCTGGAC ACCCGAAGTC TTTATTGTCA ACACCCCCTT CCCGCCCGAT
GATCGCAGTG CCGGCTACGA GCGAGGCAAC AGCATCTCGA AAGAATGGGA ACAATCGACG
ACCGATGCCG CCATTGAAAC GGCAGCTTAC GTCGCAAAGA AACTCAAAGA CCTGGCGGGT
TACGGCCGCG ATGCAAATCC GGAAGAGAAG AAGCGAAAAG TTCGCGAGTT CTGCATTCGC
TTTGTCGAAC GAGCCCACCG CAGGCCACTT TCGGACGACG AAAAGACCCA CATGGTCGAT
CGCTGGCTCG ATGCCACCGA AGACCTCGAA ACAGCCGTGC AACGCATTGT GCTGCTGACA
CTCAAATCGC CGCGATTTCT GTATCGTGAG ATCGTCGGTT CGCCCAATGA CCCCTGGAAT
GTCGCCTCGC GACTCTCGTT CACGCTCTGC GACACCATTC CCGATCAGCA GTTGCGAGAT
GCGGCTGCTA AAAATGAACT GCAAAAGCCT GATCAGCTTC AGCGACAGGC GGAACGCCTG
GTTCGAACAG ATGCGGGCAA AGCCAAGCTG AAGACCTTTC TATTGAACTG GGTGCGTGTT
GAGCATTTGC ACGATATTGC TAAAGATTCC CAGCAATATC CCGAGTTTAC ACCAGCGATT
GTCAGCGATT TGCGAACGTC ACTCGAACTG TTTGTTGATG AAGTTCTGCA GAGTAATGAA
GCGAGCCTCA AGCAGCTTCT TCTCGAAGAT CACATCTGGA TGAATGGTCG CCTCGCGAAA
TTTTATGGAG CCGACCTACC TGAGAATGCA GATTTCCAGA AAGTGCGTAT CGATAATGGC
CAGCGGGCCG GCGTGCTGAC TCATCCCTTC CTGATGGCGG GCTTTGCTTA TACTTCGACG
ACATCTCCGA TTCACCGCGG CGTGTTTGTC ACTCGCAGTG TGCTGGGCCG CTCACTCAAG
ATGCCGCCGA TTGCTGTTTC TCCCGAGCCA GCCGATTTGC ATCCCAATCT TTCAACGCGT
GAACGTGTCG ATTTACAGAC TAAAGCCGAG ATGTGCCGCA CCTGCCACAA CCTGATCAAT
CCACTGGGCT TTCCACTGGA ATCGTTTGAT GCTGTGGGCC GCTTCCGTGC TGAAGAAAAG
GGTAAGCCTG TCGATGCGAC TGGACAATAC CTCACGCGAA CTGGTGTGGA AGAGAAGTTT
GCGGGGAGCC GGGCATTGGC CGAGTTCCTC GCGACCAGCG CGGAAACGCG AGCCGCTTTC
ACTCAGCAGC TCTTCCAGAA TCTCGTGAAA CAGGCGTGGC CGGCTTACAG TAAAGATCTC
CTGACACAAC TTGATCAGAA GTTTGCGGCT TCAAACCTGA ATATCCGCGA GCTGGCCGTG
GCCATTGCTG TCGCGACAGC CCGCGTTCCA GAGACTGCCG AAACGGCTGC GAAGTGA
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| Protein sequence | MPHTSKFWFL KNLTVCVVLL GCPWMNSSVS GEEDPHQAAK VRGQALFAQK CASCHGAAGQ
GGTDSYKTPL IGDASIVELT RIIDATMPEG EPEQLDKAQS EDVARYIYDA FYSPDAQIRN
SPSRIELSRL TVRQYQQAVT DLLGSFRGGY ENTNEFGLKA TYFDGRRFRK EDKKLERIDP
VVQFDFGEGK PLPDVEMASD EFSIHWTGSL IAPETGEYEI IIKTANGVEF WLNDESKILI
DGRVRSGNDV EWRERINLLG GRRYRLRLQM FKSKNAKEKT AAIALWWRPP HKTEELIPTR
YLLPAWTPEV FIVNTPFPPD DRSAGYERGN SISKEWEQST TDAAIETAAY VAKKLKDLAG
YGRDANPEEK KRKVREFCIR FVERAHRRPL SDDEKTHMVD RWLDATEDLE TAVQRIVLLT
LKSPRFLYRE IVGSPNDPWN VASRLSFTLC DTIPDQQLRD AAAKNELQKP DQLQRQAERL
VRTDAGKAKL KTFLLNWVRV EHLHDIAKDS QQYPEFTPAI VSDLRTSLEL FVDEVLQSNE
ASLKQLLLED HIWMNGRLAK FYGADLPENA DFQKVRIDNG QRAGVLTHPF LMAGFAYTST
TSPIHRGVFV TRSVLGRSLK MPPIAVSPEP ADLHPNLSTR ERVDLQTKAE MCRTCHNLIN
PLGFPLESFD AVGRFRAEEK GKPVDATGQY LTRTGVEEKF AGSRALAEFL ATSAETRAAF
TQQLFQNLVK QAWPAYSKDL LTQLDQKFAA SNLNIRELAV AIAVATARVP ETAETAAK
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