Gene Plim_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2179 
Symbol 
ID9138883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2809143 
End bp2810324 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content53% 
IMG OID 
Productmethyltransferase small 
Protein accessionYP_003630204 
Protein GI296122426 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.41478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTCGGG TTGTCACCAG TCGTCAGTTT TCGCGAGGAG CCTCCCGGCA TCCCTGGCTG 
TTTGATTCTG CCATAGACCG CGTGGAAGGT CAGCCACAAG TTGGCGATGA AGTTCTCGTG
GTGGGGGCCA ATGAAAAATT TTTGGGCTAT GGCCTCTACA ACAGTTCCAG TCGCATTCGA
GTTCGCATCT ATTCATGGAA TGAAGATCAA CCTTTAGCGG AAGATTTCTG GCGGTCGAGA
GTCCGAATGG CGTGTGACCT GCGCCGGAAA TTCATGCCAA CTCCAACGGT TATGAATGGC
TCACGGTTGA TCTCCAGCGA GGCCGATTTT CTTTCGGGGC TAACTGTCGA TCGCTACGGA
GACTGGTTGC TGGCCCAACT GGGATCGCAC GCTCTTCAAT CCCGCATGGA ATTGCTGGTT
GATGAACTGA TGCGGCAGAC ACAAGCCAGT GGTTGCTGGC TCAGGACAGA GAAGGGGATT
CGTCAAGCCG AGGGCATGCC ATTAATAGAT GGATTGTTTC GAGGCGAAAC ACCTCCAGCG
TTTATCCCTG TTGAAGAGCA TGGGCTGGTT TACCATGTGG ATCTGGTCGA CGGACAAAAA
ACGGGTTTCT ATCTGGATCA GCGGGAGAAC AGATTCAGAG CCGCTCAGTT TGCCAGTGGC
AACATGCTTG ATCTGTGTTG TTATTCGGCG GGCTTTGGCA TGAACGCCCT GAGGCATGGG
GAAGTCACAC ATGTCATTGG TGTCGATACT TCGAAGATCG CTGTTGAGAA TGCCACTGCG
AACGTCACAC GAAATGGTCT TGCCGACCGA TATGAAGTCC GCCATGGTGA TGCTTTTGAA
GTTCTGACGG AGTTTCGTAA TCAGGGGGTC CGGTTTCAGA CCATCGTGCT GGATCCGCCC
AAGCTGGTGA AAAGCCGATC AACTATGGAT TCGGGTCTCA AAGGCTATCA CTCACTGAAT
CGACTGGCAC TGGATGTTCT TGAGCCACAG GGAACGCTCG TGACCTGCAG CTGCAGCGGA
TTGGTGACTC ATGACCTGTT TCAGCAGGTT CTTCGTGAAG CTGCCTGGCA GGCTCGGCGT
GAACTGAAAA TTTTAGAAGC GCGCGGCCCC TCGCCAGATC ATCCGCAATC ATTGCAATGT
CCGGAATCCA ACTACCTGAA GTGTTACATT ACGACCGCCT GA
 
Protein sequence
MIRVVTSRQF SRGASRHPWL FDSAIDRVEG QPQVGDEVLV VGANEKFLGY GLYNSSSRIR 
VRIYSWNEDQ PLAEDFWRSR VRMACDLRRK FMPTPTVMNG SRLISSEADF LSGLTVDRYG
DWLLAQLGSH ALQSRMELLV DELMRQTQAS GCWLRTEKGI RQAEGMPLID GLFRGETPPA
FIPVEEHGLV YHVDLVDGQK TGFYLDQREN RFRAAQFASG NMLDLCCYSA GFGMNALRHG
EVTHVIGVDT SKIAVENATA NVTRNGLADR YEVRHGDAFE VLTEFRNQGV RFQTIVLDPP
KLVKSRSTMD SGLKGYHSLN RLALDVLEPQ GTLVTCSCSG LVTHDLFQQV LREAAWQARR
ELKILEARGP SPDHPQSLQC PESNYLKCYI TTA