Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2083 |
Symbol | |
ID | 9138786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 2702713 |
End bp | 2704383 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Stage II sporulation E family protein |
Protein accession | YP_003630109 |
Protein GI | 296122331 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.611306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAGCT GGAATCGTTC ACAGAATCCT CCCGATGTCC TTCCTCCATC GATCATCATG GGGTTAGTCA TCGCCTGCGC ACTCCCTTTG GTGACCAATC TCTTCGGTAT TCGCTGGGGC ATCAATCCGG TTGACGCAGG GCCGGCCCTT CAGCAGGTTC GTGGCGAGAT CATTGTCACA CTGCTCTCAT GGACAGCTGC TTGTACCGGT GTTGTGACAG CCGTCAGCGC GTTTTCCATG TTTCGTCTCC GGGGAGATGT CACCACACCC ATTCTTGGGA CAGCACTGTT GTTCTGCGGT TTGATGGATG CTGCCAACGC ACTGGCGATC AATGGAATCC TGGTCTCGGC TTCAGATCCC TCACGATTTG CTGACTTTAC TGATGCCATG ACGCGCCTGA CCTATGCCTT GATCATTACT TTAGGGACTG CTCCATTCGC CCTGGGGTTC ATCACACCCG AATGGAGTGG ATCCAGGAAT AACCGCAACG CAGGTTTTCT GATTTGTGCC GCGATCGTGT TCGGACTCGG TGCATTCTCG ATTGTCGAAC TCTGTGCCTG GATTCCGGAG TTGCCCAAAA CAGTGTTCCC TGCATCTTCG ATCCCCAGGC CTCTCGATGC GTTCACATTG ATCATTTACC TCATCACTGG AATATTTTTT CTACCACGTT TTTACAAGCA GTATCCCAGC CTGTTCTCAC ATGGTCTGCT GCTGAGCGTG ATCCCCCATA TTCTACTGCA AATGTATATG GCCTTTGGAT CTCGCCGGTT CGACGACAAT GCGGCAGTCA TCGCTCATTA TCTGAAGATC GTCGGCTATC TCGTCCCATT TATTGGTCTG CTCTGCGATT ACTCTCGTGT CTCGCAGGTC GAAGCCAAAA TGTTGAGTAC CGAAGCCCAA CTTCAATTGG CTCGCCAATT GCAGCAGGCA CTTCTTCCCA GAGAAGCACC AGTCATCAAG AACTATCAGG TGGCAGGTTT TTCAATCCCA GCAGAAGCTG TGGGAGGAGA TTACTTCGAC TATCTGGTTT ATAACGATGG ATCGATTGGC CTGGTGATTG CCGATGTCAG TGGTCACGAC CTGGGTGCTT CGATCCTCAT GTCTCAGACG CGTGCATTTC TACGTGCTGA TCTGAGTGTG GGTCACGATC CAGCGATCAT TGCCGAACGT CTCAATCGAT TTCTCTGCGA TGGAGATATT CTCGGCCACA GGTTTGTCAG TCTGTTTTTT GCTCGACTGA TTCCCGAAGA ACACGAATTG CGTTACATCG CTGCAGGTCA ACCGGGCGTT GTTCTATTCC CCGATGGTGG AACTCAAGCC CTGTCACCCA CTGGCCCCGT GCTGGGGTTT GATCCTCATT GTCAGTTCGT TCAAGAACAA ACGAAATTGC CGCCCGGCAG TCTGCTGCTC CTTTACACGG ATGGCATCAC TGAAACGACA GATACCTCGG GACTTGCTCT GGGGACACAG CCTCTGTACG AGTTACTGCA TGCCGGGCAA GGCCAGTCGG CTGAACACCT CACGAGTGTG ATCAAAACGG CTGTCCTGAG GCATGCCGGC GAACGCGGCC CGGTGGATGA CCTGACCTGT CTTTTGCTGA AGCGATCTCC GCAGGAAGCG AGTATACCGC TGAATATCGG AGCATCTCTC GCGCATGCCA CGAAAGGCTA A
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Protein sequence | MPSWNRSQNP PDVLPPSIIM GLVIACALPL VTNLFGIRWG INPVDAGPAL QQVRGEIIVT LLSWTAACTG VVTAVSAFSM FRLRGDVTTP ILGTALLFCG LMDAANALAI NGILVSASDP SRFADFTDAM TRLTYALIIT LGTAPFALGF ITPEWSGSRN NRNAGFLICA AIVFGLGAFS IVELCAWIPE LPKTVFPASS IPRPLDAFTL IIYLITGIFF LPRFYKQYPS LFSHGLLLSV IPHILLQMYM AFGSRRFDDN AAVIAHYLKI VGYLVPFIGL LCDYSRVSQV EAKMLSTEAQ LQLARQLQQA LLPREAPVIK NYQVAGFSIP AEAVGGDYFD YLVYNDGSIG LVIADVSGHD LGASILMSQT RAFLRADLSV GHDPAIIAER LNRFLCDGDI LGHRFVSLFF ARLIPEEHEL RYIAAGQPGV VLFPDGGTQA LSPTGPVLGF DPHCQFVQEQ TKLPPGSLLL LYTDGITETT DTSGLALGTQ PLYELLHAGQ GQSAEHLTSV IKTAVLRHAG ERGPVDDLTC LLLKRSPQEA SIPLNIGASL AHATKG
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