| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1829 |
|---|
| Symbol | |
|---|
| ID | 9138530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 2387156 |
|---|
| End bp | 2390056 |
|---|
| Gene Length | 2901 bp |
|---|
| Protein Length | 966 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | phosphoribosylformylglycinamidine synthase II |
|---|
| Protein accession | YP_003629858 |
|---|
| Protein GI | 296122080 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTGGG AAGTTGAGAT TCTCTCCCGT CCGGAACAGA TTGACCGGGA AGGCCAGCGA
ATTCTGGGGG AGGCTCGCTT ACTGGGCCTC AACTCGGTTC AAACGGTACG AGCGGGTCGC
TCGTTTTTGC TGGAAGGTCA GATTGACGAA GCCGTCATCC TGAAAGCCAT GCAGTTCTTG
CTGGTCGATG AAGTTGTGGA AATCGCACGT GTGCGAAAGC CCGCCGAAGT CGATGCCAAT
GACGATTCAA CGGCCACTGG GCAGCTTTTC AACGTGCTCT ACAAACCTGG TGTGACGGAC
AATACAGCAC TCAGCACCCG GCGGGCACTT CAGCAGGCCG GGATTGCGAT TGAGGAAGTG
GCTACCTGCC GCAAATACTG GTTTGATCGT CAAGCTCAGT CGAATCAGAT CAACGTATTG
GCACAGCGGG TGTTGGGGAA TGACGCCATC GAGCGGATTG TGCGGGGCCC GCTGCAGATG
ACGACATTAA GCTTCGGGCA TACCTATCAA CTGGAGCTCA AACATGTGCC CATTCGCGAA
CTGGATGATC AGGCACTGAT GAAGCTCAGC AAGGAAGGCC AGTTATATCT GAGCCTCGCC
GAGATGCAGA CGATCCAGAA GCACTTTCGG GATCTGCAGC GCGACCCGAC CGATATCGAG
CTGGAAACGG TCGCTCAGAC ATGGAGCGAG CACTGTTCTC ATAAGACGCT CGGCGGACGG
ATTCGTTACT CCGATGAACA CGGCACTCGT CAATTTGGCA ACATGCTGAA GGAAACGATT
TTCGCTGCCA CCCAGCAACT GCGCAAAGAA TGGGGCAAAG ATGACTGGTG CGTGAGTGTC
TTCAAGGATA ACGCGGGGAT TGTCACCTTC GAAGAAGGTG AAAACGTCTG TATCAAAGTG
GAAACGCATA ACCACCCCTC CGCCATTGAG CCTTACGGCG GTGCCAATAC CGGCATTGGT
GGTGTGGTGC GTGATCCGCT GGGGACGGGC CTGGGTGCGA AGCCTGTCTG CAATACAAAC
GTCTTCTGCT TTGCGCCGCC GGATACTCCG CACGAAACGC TTCCTCCCGG CGTGCTGCAT
CCGCGGCAAG TCGCCTTGGG TGTTGTGGCT GGGGTGCGCG ATTACGGCAA CCGCATGGGG
ATCCCGACGG TCAACGGAGC CGTCTTCTTC GATGAACGGT ATCTGGGCAA CCCGCTGGTT
TATTGCGGCA CGGTCGCCAT GATCCCTGCC AACCGGTGCG AAAAGAAAGT TTCGCCCGGT
GAATTGATTG TCGCACTGGG TGGACGCACT GGGCGCGATG GAATTCATGG GGCGACGTTC
TCTTCTGCCG AGTTAACGCA GGAGAGCGAA ACGATCTCGG GCGGTGCGGT GCAGATTGGG
AATGCTGTCA CAGAGAAAAT GTTGATGGAT GTACTGCTGG TGGCTCGCGA TCGCGGGCTG
TACTCAGCCG TTACCGATTG CGGGGCTGGC GGATTCAGCA GTGCAGTCGG CGAAATGGGC
GAAGAGACCG GCGCTGTGGT GTGGTTGGAA AAAGCACCGC TGAAGTACGC TGGTCTCACC
TACACAGAGA TCTGGATTTC GGAAGCTCAG GAACGCATGG TGCTGGCCGT ACCTCCTGAG
AACTGGGATG AATTCCACGC TTTGTGTGCT TCGGAAGGTG TCGAAGCGAC GGCGATTGGG
CAATTCACGG ATGATCATAA GCTGACGCTG ACTTACGATG GAAAGCCTGT GGGAGAGCTT
TCGATGGAGT TCCTCCACGA TGGCCGCCCG CCTGTGATTC GGGAAGCGAC CTATTCGCCC
AAGACAGACG GCTCGAAGGC CACGTTTGCT CCTAAAACAG ACTACACCGA CGATGTCCAC
AAGATCCTCT CCTCGCTGAA TGTTTGCAGC AAAGAATGGA TCATCCGGCA ATACGACCAC
GAAGTGCAGG CCGGAAGTGT CGTTAAGCCA CTGGTGGGTG TGATGTGCGA TGGACCTTCG
GACGCCGCCG TCATCCAGCC CATTCTCTCT TCGAAACGCG GGCTCGTCAT TTCGAATGGA
ATGAATCCGC ATTACGGCGA TCATGATCCC TACTGGATGG CATTTGCGGC TATCGATGAA
GCCTTGAGAA ATTGTGTGGC CTGCGGTGCT GATCCGTCGA AGATTGCCAT TCTCGACAAC
TTCTGCTGGG GAAATACCGA ACGGCCGGAA ACGCTCGGTT CGCTCGTGCG GGCAGCTCTG
GGTTGCCACG ATGCGGCTCT GGTTTACAAA ACGCCATTTA TCAGTGGAAA AGACAGCTTG
AATAATGAGT TCAGCTACGT TGACGAGCAG GGCGTGAAAC AAACCGTGGC AATTCCTTCA
TCACTATTGA TCTCGGCACT TGGGCAGATT ACTGATGTTC GCAGGGCGAT CACGATGGAT
CTCAAGAGTG TCGGCCATGT GCTGTATCTG ATTGGTGAAA CTCGTAACGA GTTTGGTGGC
AGCCATTATG CACTGGTCAA CGATTTGTCT GGTGGCAGTG TGCCGAGAGT CAACAGGGAA
CTGGCGCCAC GAGTGCTGGC ACGGACTCAT CAATTGATTG CCCAAGGACT CGTGCGAAGC
TGTCACGACT TGAGTGAAGG GGGCCTGGCG GTGGCACTGG CAGAGATGGC GTTTGCCGGC
GAACTGGGGA TTGATATCGA TCTTGGTGAT GCCGATGCGA CGACAATACT CTTCTCGGAA
TCGACGACGC GCTTTGTGGT CGAAGTGAAG CCAGATGATG AGGCACGCCT TCGAGAAGTG
CTGGCCGGTG TGCCGCATCA GAAACTGGGT GTGGTGACAG AGACCGGCCG TGTGGAGATC
AGTGGTCAGG GGAAAAAGCT TGTCAGTGCC GCGAACGAAG AGTTCAAACA AAGCTGGCAG
GCCCCATTGG CCTGGAGCTA A
|
|---|
| Protein sequence | MLWEVEILSR PEQIDREGQR ILGEARLLGL NSVQTVRAGR SFLLEGQIDE AVILKAMQFL
LVDEVVEIAR VRKPAEVDAN DDSTATGQLF NVLYKPGVTD NTALSTRRAL QQAGIAIEEV
ATCRKYWFDR QAQSNQINVL AQRVLGNDAI ERIVRGPLQM TTLSFGHTYQ LELKHVPIRE
LDDQALMKLS KEGQLYLSLA EMQTIQKHFR DLQRDPTDIE LETVAQTWSE HCSHKTLGGR
IRYSDEHGTR QFGNMLKETI FAATQQLRKE WGKDDWCVSV FKDNAGIVTF EEGENVCIKV
ETHNHPSAIE PYGGANTGIG GVVRDPLGTG LGAKPVCNTN VFCFAPPDTP HETLPPGVLH
PRQVALGVVA GVRDYGNRMG IPTVNGAVFF DERYLGNPLV YCGTVAMIPA NRCEKKVSPG
ELIVALGGRT GRDGIHGATF SSAELTQESE TISGGAVQIG NAVTEKMLMD VLLVARDRGL
YSAVTDCGAG GFSSAVGEMG EETGAVVWLE KAPLKYAGLT YTEIWISEAQ ERMVLAVPPE
NWDEFHALCA SEGVEATAIG QFTDDHKLTL TYDGKPVGEL SMEFLHDGRP PVIREATYSP
KTDGSKATFA PKTDYTDDVH KILSSLNVCS KEWIIRQYDH EVQAGSVVKP LVGVMCDGPS
DAAVIQPILS SKRGLVISNG MNPHYGDHDP YWMAFAAIDE ALRNCVACGA DPSKIAILDN
FCWGNTERPE TLGSLVRAAL GCHDAALVYK TPFISGKDSL NNEFSYVDEQ GVKQTVAIPS
SLLISALGQI TDVRRAITMD LKSVGHVLYL IGETRNEFGG SHYALVNDLS GGSVPRVNRE
LAPRVLARTH QLIAQGLVRS CHDLSEGGLA VALAEMAFAG ELGIDIDLGD ADATTILFSE
STTRFVVEVK PDDEARLREV LAGVPHQKLG VVTETGRVEI SGQGKKLVSA ANEEFKQSWQ
APLAWS
|
|---|
| |