Gene Plim_1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1569 
Symbol 
ID9138269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp2022674 
End bp2023417 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content52% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003629601 
Protein GI296121823 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.169085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTTC AAATTGCAGA TCGAGTTGTG CTGGTCACTG GTGCCAATCG CGGAATTGGA 
AAATCGATTG TCGAAACACT TCTGGCCCAT GGGGCGAAAA AGGTCTATGC CGGTGTGCGG 
GAGTTATCCA AAGCCAAAGA CCTGGTTGAG CTGGGTCAGG GTAAGGTGAT ACCCATCATC 
ATCGATCTGG CAAACCGAAC CACGATCGAC CAGGCAGCAG CTGATGCCCA GGATGTCGAG 
TTGGTTGTGA ATAACGCCGG GATTGCCCGA ACAACATCCC TTTTCAGTGA GCAGGTGTAT 
GGATCGCTGG ATGAAGAATT GAAAGTCAAC CTGTATGGCG TCATTGCCAT GGCCAGGGCT 
TTTGCACCAG TTCTAAAAGC GAATGGTGGG GGAGCGTTCG TGCAACTCAA TTCGGTGGTG 
TCGATCAAGT CTTTTGGAGA CTTTGCCACC TATAGTGCTT CCAAAGCCGC TGCCTACTCG 
GTCACTCAGG CCATTCGCGA TGGGCTTAGA GAACAAGGGA CATTAGTGGT CAGCGTCCAT 
CCGGGGCCGA TTGCGACCGA TATGGCAGCA GCCGTCGGGT TATTGGAAGT CGCTGATCCT 
CCCGCGGTCG TTTCTGAAGG GATCGTTCAA GCACTGGCGC AGGGTCAGTT CCATCTCTTC 
CCTGACAAAA TGGCAAAACA GTTCTGGGGT GTGTATGAAA ACTACGCCAG GAATATTGTG 
GAAGGAACAG GAACTGGTGA GTGA
 
Protein sequence
MSFQIADRVV LVTGANRGIG KSIVETLLAH GAKKVYAGVR ELSKAKDLVE LGQGKVIPII 
IDLANRTTID QAAADAQDVE LVVNNAGIAR TTSLFSEQVY GSLDEELKVN LYGVIAMARA 
FAPVLKANGG GAFVQLNSVV SIKSFGDFAT YSASKAAAYS VTQAIRDGLR EQGTLVVSVH 
PGPIATDMAA AVGLLEVADP PAVVSEGIVQ ALAQGQFHLF PDKMAKQFWG VYENYARNIV 
EGTGTGE