Gene Plim_1533 details

Gene Information

• Locus tag: Plim_1533
• ID: 9138233
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 1976945
• End bp: 1978981
• Gene Length: 2037 bp
• Protein Length: 678 aa
• Translation table: 11
• GC content: 53%
• Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
• Protein accession: YP_003629565
• Protein GI: 296121787

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.895554
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCAATG CCCGTAGACA GTTTGAAATC CACCATCGAT TCTCCTCGAA CGTGTGGCGA 
CTGCAACGAA CTTTCTGGAT CTGGTCTGTC GTGACCTGTC TGAGTCTGGC ATTACAGGTC 
AATGGTGTCT GTCCTGCGCA AGAATCATCT GCGTCTCTCG TGAAGACAAA TACAAAACCC 
GCAATTTCGT TGCCCGACTC AAAGCCTCAG CACGCTCTCG AAACGGGAGA GGCTTCGAAA 
CCACTATTGA ATACCCAACT GCTCGACCAG CACTCGCGCG TTCACGAGTT TCGCGAGAAG 
TCTGATACGC CATTACGAGT TGTGGTGTTT ATCAACGGCG ATTGCCCGAT TGCTCGCAGC 
TACATCCCCG AACTGAATCG ACTTCACGAA AAATGGAACG AAAAAACCGA AACCGTTTCA 
TTGCATGCCG TCTGGGGGAA TCCATTCTCA ACACATGCTG AATTACGGAA ATTCGTCGAG 
GATTACGCGA TCAAGTTCCC GATCGTTTTC GATCCCCTGG CCCAACTCGC TCATGCACTT 
AAACCAACAC ACGTTCCCGA ATCTTTTCTT CTCGATGTTC AAGGGAGAAT CGCTTACCGC 
GGCCGGATCG ACGAACGCTG GGCCGCCCCG GGTGTGAAGC GTGCCGTCGT CAAAACTCGC 
GATCTGGAAA CGGCGGTCGA GACACTCCTG CTGAACCCGG CTGCCAAAAT CGCTTCCACC 
TCGGCTGTTG GATGCCTTTA CGACTTGATC CCAACTCAAG AACTTCTGCG TCCGAATAAT 
GACTCGACGC AACAAAAGTT GACCTGGTCT CAAGTAACCG CGTCCATCAT TTACGCAAAC 
TGCACACATT GTCATCAGGC AAACGCCGTC GGGCCCTTTC CACTGGAAAC ATGGCAGGAT 
GTCGTCAACC AGCGGGCTCA GATGATCGAG GAAATCCAGA CATCCCGGAT GCCTCCATGG 
ATGCCTGATG CCAATTGTGG CGAATTCCTG GGACAGCGAA GCTTGTCCGA GATCGAGAAA 
CAGGCACTCT CCAAATGGGT TGAGCAAGGG ACACCCAGCG GAGAACTGAA CGAAGCCCCT 
GTGCCTCCAC CAAAGAAATC CACCTGGGAA CTGGGCCCGC CTGATCTAAT TGCCGAGATG 
GCTGCAGACT TCTTCATCCC AGCGGATGGC CCGGATCTTT TTCAGAACTT TGTGATCCCG 
TTGCCTCTGG ATAGTGACAA AGTCGTGGCG GCCATCGAGT TTCAACCGGG GGATGCGAGT 
GTGGTCCACC ATACGCTCTG TTTTCTCGAT GCCAATCACC AGGGTCGCAA GCTCGATGCA 
AAAACTCCTG AGCCCGGATA CAGCAGCTTC GGCAGCCCCG GCTTTCTCCC CACCGGTTCA 
ATTGGTGGCT GGTCTCCAGG AAATACACCG CGAAAATTAC CTGGGCACAT GGGACGATAC 
TTAAAGAAAG GTTCCGATCT GGTGCTGCAG ATTCATTATC ACCCTTCCGG GAAAGCCACC 
AAAGATCGCT CGCGCGTGGG AATCTATTTT GCCGATCAGC CGAAGAATAT TGTCGCTGCT 
GTCTGGGCCG CCAGTTATGA CATTGATATT CCCGCTGGTG AACGGAACTA CGAACGACGA 
GCTTCGTACA AATTGCCCCA ACCCGTGACA TTAATGGGGG TGATCCCTCA CATGCATCTG 
TTGGGAAAGT CATTTACCGC GCAGGCTGTC TTGCCGGACA ACACAATTCA GCCCATCATC 
CGGATCTCGA ATTGGAAATA TGCCTGGCAG GACGAATTTC ATCTTTCTCA GCCGATCCAT 
CTCCCCGCAG GAACCCGGCT CGAAATCATC GCTGCGTGGG ATAACTCAGA GGAAAATCCA 
TTAAACCCGT CGAATCCGCC TCGTCGTGTG ACCTGGGGTG AGCAGACCAC CGATGAAATG 
GTTTACGGTT TCTTTCTCGT GGCGGCTGAA GAGCCCAAAA AGCTGATTCC GCTGGCTCTC 
GACAATATCT CCGTTGATCT CAAGAGCAGA GCCCTGCACG GGCATCCCAT TCGTTAA 

 

Protein sequence

MVNARRQFEI HHRFSSNVWR LQRTFWIWSV VTCLSLALQV NGVCPAQESS ASLVKTNTKP 
AISLPDSKPQ HALETGEASK PLLNTQLLDQ HSRVHEFREK SDTPLRVVVF INGDCPIARS 
YIPELNRLHE KWNEKTETVS LHAVWGNPFS THAELRKFVE DYAIKFPIVF DPLAQLAHAL 
KPTHVPESFL LDVQGRIAYR GRIDERWAAP GVKRAVVKTR DLETAVETLL LNPAAKIAST 
SAVGCLYDLI PTQELLRPNN DSTQQKLTWS QVTASIIYAN CTHCHQANAV GPFPLETWQD 
VVNQRAQMIE EIQTSRMPPW MPDANCGEFL GQRSLSEIEK QALSKWVEQG TPSGELNEAP 
VPPPKKSTWE LGPPDLIAEM AADFFIPADG PDLFQNFVIP LPLDSDKVVA AIEFQPGDAS 
VVHHTLCFLD ANHQGRKLDA KTPEPGYSSF GSPGFLPTGS IGGWSPGNTP RKLPGHMGRY 
LKKGSDLVLQ IHYHPSGKAT KDRSRVGIYF ADQPKNIVAA VWAASYDIDI PAGERNYERR 
ASYKLPQPVT LMGVIPHMHL LGKSFTAQAV LPDNTIQPII RISNWKYAWQ DEFHLSQPIH 
LPAGTRLEII AAWDNSEENP LNPSNPPRRV TWGEQTTDEM VYGFFLVAAE EPKKLIPLAL 
DNISVDLKSR ALHGHPIR