Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1385 |
Symbol | |
ID | 9138080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 1767623 |
End bp | 1768504 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | Rhomboid family protein |
Protein accession | YP_003629418 |
Protein GI | 296121640 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.149194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGAGAGA TTGGTGTTCT CGATGACGTT CAGCAGGCCG ATCTACTGGC AGATTTTCTG CTGTCAAAAG GCATCAAATG TCATATCGAT AACGACAAAT CTCAGTTCGT GCTGTGGGCG CTGGATGATG ATCTCGTGGC AAAAGCCAAA GAACATCTGC TGGCCTTCAA AGCCAACCCT CTCGATCCGG TTTATGCCGA TGGGGCCAAA GCGGCCCGGC AGATTCGCAA AGAGGAACTC GCCAGGCGAA AGCAATATCG CAAGAACGTC AAAGACATCC GCTCATCATG GAGTCTTGCT CCCACGACTG GCCCGACATT TGTCTCTGCA CTCTTGCTCT CGATCTGCCT GATAGTGGGA TATCTGACAT GGTTAGGTCA GGCCGGAAAC ACGATTACGC CCTGGTTGCT CTTCTCGACT GACATGAACT GGAGCGAATT GAAAGAGGGT GAACTCTGGC GGCTGATTAC TCCCATTTTC CTGCATTTTG GATTGATGCA TATTCTCTTT AACGCCATGT GGCTGGTCAG TTTGGGCCCC CTGATCGAAC GACGCAATGG ATCATTTTGG CTGTTGGGGT TTGTGTTGAT CACGGGCATT GCTTCGAACT TTGCTCAGGC TTATTTCGTC AGCCCGGCAT TTGGCGGCTT CAGCGGAGTG AATTATGGAC TGATTGGCTA TGCCTGGATC ATGGGACGGA GAGCACCCGG TTCTGGCATC AGGCTCTCCC CGCAATCGGC AGGGTTAGCC ATTGCCTGGG GACTATTAGG GATTGCCGGT GAGTTTGTTC ATCATGAATC GTGGATGGCC AACTGGGCAC ATGGTGTAGG CTTTGCAGTC GGTTGTTTCT GGGCATGGGC TGAAACTGAA AAGAGCAGGT AA
|
Protein sequence | MREIGVLDDV QQADLLADFL LSKGIKCHID NDKSQFVLWA LDDDLVAKAK EHLLAFKANP LDPVYADGAK AARQIRKEEL ARRKQYRKNV KDIRSSWSLA PTTGPTFVSA LLLSICLIVG YLTWLGQAGN TITPWLLFST DMNWSELKEG ELWRLITPIF LHFGLMHILF NAMWLVSLGP LIERRNGSFW LLGFVLITGI ASNFAQAYFV SPAFGGFSGV NYGLIGYAWI MGRRAPGSGI RLSPQSAGLA IAWGLLGIAG EFVHHESWMA NWAHGVGFAV GCFWAWAETE KSR
|
| |