Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0674 |
Symbol | |
ID | 9137355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 877348 |
End bp | 879099 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | single-stranded-DNA-specific exonuclease RecJ |
Protein accession | YP_003628720 |
Protein GI | 296120942 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCTCGA CAGAGCGGCG GGTCTGGCAA TATGCACATG TCGATCAAGA ATCCATTCGC AGGCTGGCCG CAGAACTGCA GATCAGCCCA CTCCTGGCTC GCGTCCTTGT CGCCCGTAAG ATTCATACCC GCGAAATGGG TTTGAAGTTC TTCTCCCGCA AACTCAGCGA ACTTCACGAT CCCGAACAAT TGCCCGGCAT CAGTCAAGCC GCCGACCGCA TCGTTGAAGC CATTAAACAT CAGCGACTCA TCACGATATA CGGCGATTAC GATGTCGATG GTGTCACTGC CACCAGCCTC TTATGGCATT GTATCCGCCT CGCGGGTGGT CGCTCCGAAT ACTATATTCC AGCCCGTCTC GAAGAAGGTT ACGGGCTCAA CAGCACGGCC ATCGAAACTC TCGCAGCCCA GGATCCATCC CAGCTCGTCG TCAGTGTTGA TTGTGGCATT ACCAGTCTTA TCGAAGCCAG ACGCGCCCGC GAACTCGGCC TCGAACTGAT CATTACTGAT CATCACCAGT TTGCCGAAAA TTTCCCGGAA GAAACGATTC TCGTCCACCC TCGTCTGCCC GGTAGCAGCT ACCCATTCGG CGAGCTTTGC GGTGCCGGCG TCGCCTTCAA ACTCGCCTGG GCTGTCTGTG CTCGATTAGG GGATGGCAAA AAGGCTTCTC CCCGCATGAA AGAGTTTCTC TTAAGTGCCA TTGGCCTGGC AGCCATCGGT ACCGTTGCCG ACGTCGTTCC CTTAACGGGA GAAAACCGTG TTCTCGTTCA CTATGGCCTT TCCACCATCG GCGAGAAATC CTCCATTGGT CTGAAGGCAC TCATCAAAGC GGCTGGGCTT CACGAAAAAA CATCTCTCGC GGCAGATGAT ATTGGCTTTT CCCTGGGCCC ACGAATTAAT GCTGCAGGCC GCTTAGGGCA AGCCCGCCTC GCTGTCGAAC TCCTGACGAC CGATAACGAA GATCGAGCGC AGAAACTGGC TGCCTACCTC GATGAACTCA ACAAGCAGCG ACAATCGCTC GAACGAAAAA TGTTCAAGCA GGCCAAAGAT CTCGTCAACG ATCACCCTGC CTGGAGCGAA GAAAAAGCAC TCGTGCTCAC CCATGACGAA TGGCATGCCG GCGTGATTGG TATCGTCGCT GGCAAAGTGG CTGAAAGTTT TCAACGACCT GCCATTCTCC TGGGCCCCTC GACTTCAGCC GATATTCTGC AAGGCTCTGG CCGCTCATTC GCCGGATTTA ATCTGCATGA AGGGCTGGTC GCTTGCCGGG AGCACCTTAT TACGTTCGGT GGTCACCATG CGGCAGTCGG CATGAAGTTG TCCCGCAAGC ATTTGGATAC ATTCCGGGCG TCGCTGGTCG ATTTTGTTTC TCAGAATCAC TCGGTCGAAC CAGGTTCAGC CCCTTTGCCG ATCGATGCCG AAGTGACCTT CCAGGAAATC AGCACCCGGG CTATTGAAGA ACTCGATCTG CTGGCCCCTT TTGGCAGTGC CAACCCTCGC CCCATGTTCG CCGCGACTCG TGTGGAACTG GCTGCACCAC CGAAAACTAT GGGTGAAGGA GGGCGCCACT TATCGCTCCT GCTCAAGCAG CACGATAAAA CCTTGCGGGC CGTCGCTTTT GGGCAGGGAG AATGGGCTGA AGAGATCGCC GCACACTCGG CAATTCACCT CGCCTTTCAG CCCATCATCA ATGAATTCCG CGGCCAGAGA AATGTCGACC TGCACATTAA AGACTGGGCC CCCGCCACTT AA
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Protein sequence | MVSTERRVWQ YAHVDQESIR RLAAELQISP LLARVLVARK IHTREMGLKF FSRKLSELHD PEQLPGISQA ADRIVEAIKH QRLITIYGDY DVDGVTATSL LWHCIRLAGG RSEYYIPARL EEGYGLNSTA IETLAAQDPS QLVVSVDCGI TSLIEARRAR ELGLELIITD HHQFAENFPE ETILVHPRLP GSSYPFGELC GAGVAFKLAW AVCARLGDGK KASPRMKEFL LSAIGLAAIG TVADVVPLTG ENRVLVHYGL STIGEKSSIG LKALIKAAGL HEKTSLAADD IGFSLGPRIN AAGRLGQARL AVELLTTDNE DRAQKLAAYL DELNKQRQSL ERKMFKQAKD LVNDHPAWSE EKALVLTHDE WHAGVIGIVA GKVAESFQRP AILLGPSTSA DILQGSGRSF AGFNLHEGLV ACREHLITFG GHHAAVGMKL SRKHLDTFRA SLVDFVSQNH SVEPGSAPLP IDAEVTFQEI STRAIEELDL LAPFGSANPR PMFAATRVEL AAPPKTMGEG GRHLSLLLKQ HDKTLRAVAF GQGEWAEEIA AHSAIHLAFQ PIINEFRGQR NVDLHIKDWA PAT
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