Gene Plim_0674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0674 
Symbol 
ID9137355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp877348 
End bp879099 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content55% 
IMG OID 
Productsingle-stranded-DNA-specific exonuclease RecJ 
Protein accessionYP_003628720 
Protein GI296120942 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTCGA CAGAGCGGCG GGTCTGGCAA TATGCACATG TCGATCAAGA ATCCATTCGC 
AGGCTGGCCG CAGAACTGCA GATCAGCCCA CTCCTGGCTC GCGTCCTTGT CGCCCGTAAG
ATTCATACCC GCGAAATGGG TTTGAAGTTC TTCTCCCGCA AACTCAGCGA ACTTCACGAT
CCCGAACAAT TGCCCGGCAT CAGTCAAGCC GCCGACCGCA TCGTTGAAGC CATTAAACAT
CAGCGACTCA TCACGATATA CGGCGATTAC GATGTCGATG GTGTCACTGC CACCAGCCTC
TTATGGCATT GTATCCGCCT CGCGGGTGGT CGCTCCGAAT ACTATATTCC AGCCCGTCTC
GAAGAAGGTT ACGGGCTCAA CAGCACGGCC ATCGAAACTC TCGCAGCCCA GGATCCATCC
CAGCTCGTCG TCAGTGTTGA TTGTGGCATT ACCAGTCTTA TCGAAGCCAG ACGCGCCCGC
GAACTCGGCC TCGAACTGAT CATTACTGAT CATCACCAGT TTGCCGAAAA TTTCCCGGAA
GAAACGATTC TCGTCCACCC TCGTCTGCCC GGTAGCAGCT ACCCATTCGG CGAGCTTTGC
GGTGCCGGCG TCGCCTTCAA ACTCGCCTGG GCTGTCTGTG CTCGATTAGG GGATGGCAAA
AAGGCTTCTC CCCGCATGAA AGAGTTTCTC TTAAGTGCCA TTGGCCTGGC AGCCATCGGT
ACCGTTGCCG ACGTCGTTCC CTTAACGGGA GAAAACCGTG TTCTCGTTCA CTATGGCCTT
TCCACCATCG GCGAGAAATC CTCCATTGGT CTGAAGGCAC TCATCAAAGC GGCTGGGCTT
CACGAAAAAA CATCTCTCGC GGCAGATGAT ATTGGCTTTT CCCTGGGCCC ACGAATTAAT
GCTGCAGGCC GCTTAGGGCA AGCCCGCCTC GCTGTCGAAC TCCTGACGAC CGATAACGAA
GATCGAGCGC AGAAACTGGC TGCCTACCTC GATGAACTCA ACAAGCAGCG ACAATCGCTC
GAACGAAAAA TGTTCAAGCA GGCCAAAGAT CTCGTCAACG ATCACCCTGC CTGGAGCGAA
GAAAAAGCAC TCGTGCTCAC CCATGACGAA TGGCATGCCG GCGTGATTGG TATCGTCGCT
GGCAAAGTGG CTGAAAGTTT TCAACGACCT GCCATTCTCC TGGGCCCCTC GACTTCAGCC
GATATTCTGC AAGGCTCTGG CCGCTCATTC GCCGGATTTA ATCTGCATGA AGGGCTGGTC
GCTTGCCGGG AGCACCTTAT TACGTTCGGT GGTCACCATG CGGCAGTCGG CATGAAGTTG
TCCCGCAAGC ATTTGGATAC ATTCCGGGCG TCGCTGGTCG ATTTTGTTTC TCAGAATCAC
TCGGTCGAAC CAGGTTCAGC CCCTTTGCCG ATCGATGCCG AAGTGACCTT CCAGGAAATC
AGCACCCGGG CTATTGAAGA ACTCGATCTG CTGGCCCCTT TTGGCAGTGC CAACCCTCGC
CCCATGTTCG CCGCGACTCG TGTGGAACTG GCTGCACCAC CGAAAACTAT GGGTGAAGGA
GGGCGCCACT TATCGCTCCT GCTCAAGCAG CACGATAAAA CCTTGCGGGC CGTCGCTTTT
GGGCAGGGAG AATGGGCTGA AGAGATCGCC GCACACTCGG CAATTCACCT CGCCTTTCAG
CCCATCATCA ATGAATTCCG CGGCCAGAGA AATGTCGACC TGCACATTAA AGACTGGGCC
CCCGCCACTT AA
 
Protein sequence
MVSTERRVWQ YAHVDQESIR RLAAELQISP LLARVLVARK IHTREMGLKF FSRKLSELHD 
PEQLPGISQA ADRIVEAIKH QRLITIYGDY DVDGVTATSL LWHCIRLAGG RSEYYIPARL
EEGYGLNSTA IETLAAQDPS QLVVSVDCGI TSLIEARRAR ELGLELIITD HHQFAENFPE
ETILVHPRLP GSSYPFGELC GAGVAFKLAW AVCARLGDGK KASPRMKEFL LSAIGLAAIG
TVADVVPLTG ENRVLVHYGL STIGEKSSIG LKALIKAAGL HEKTSLAADD IGFSLGPRIN
AAGRLGQARL AVELLTTDNE DRAQKLAAYL DELNKQRQSL ERKMFKQAKD LVNDHPAWSE
EKALVLTHDE WHAGVIGIVA GKVAESFQRP AILLGPSTSA DILQGSGRSF AGFNLHEGLV
ACREHLITFG GHHAAVGMKL SRKHLDTFRA SLVDFVSQNH SVEPGSAPLP IDAEVTFQEI
STRAIEELDL LAPFGSANPR PMFAATRVEL AAPPKTMGEG GRHLSLLLKQ HDKTLRAVAF
GQGEWAEEIA AHSAIHLAFQ PIINEFRGQR NVDLHIKDWA PAT