Gene Plim_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0018 
Symbol 
ID9136671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp23639 
End bp24388 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content55% 
IMG OID 
Productprotein of unknown function DUF1080 
Protein accessionYP_003628070 
Protein GI296120292 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATTC AAAGTGTGAT TGGTCGCTGT GCCATGATGG CGGCTGGCTG GATAATGTTT 
TCGGATCTGC CAGCGGTCGT GGCTGAAGAG ACCGCTGCCG CCACTGGTGT CGTGGCGAAG 
ATCGATGGCG TTGGGCCCGG CTGGAGGGCT TTGGGCAAAG ACGACTTTAC CAACGTGAAT 
TGCTACGAGG ATACCTGGAC CTGGGATGGT TCATTGGTCA AATGCACGGG CAAGCCGGTG 
GGTGTCATTC GCTCGATCAA GCCTTACACG AATTTTGAGC TGGTGGCTGA GTGGCAGCAC 
CTGCGTGCCG GTGGGAACTC GGGAATTTTT GTCTGGGCCA GCGAACAGGC ATTGAACAGC 
ATCAAGCCTG GACAGCTTCC CCCGGGCGGT ATTGAAGTGC AGGTCCTCGA TCATGGCTAT 
ACCGAACAAT ACGAGAAATC GACTGGCAAA AAGGCCGATT GGTTTACTTC GCATGGGGAT 
GTCTTCCCTG TAGGTTCATC GAAGATGAAG CCTTTTCCAC CCACAGCCCC CAATGGCCAG 
CGTTCGTTCC CGAGGAAAAA CCTCAGCAAA GGGATCAACG AGTGGAACCA CTACTATGTG 
CGGGCCATTA ATGGCGAGAT CCGCCTGTGG GTGAATGGCG AGGAAGTTTC GGGCGGTGAA 
AAGTGCGAAC CCGCGACAGG ATTTCTCTGC CTCGAATCGG AAGGGGCTCC CGTAGAATTC 
CGCAACATCC GGATCCGCGA ATTGCCCTAA
 
Protein sequence
MIIQSVIGRC AMMAAGWIMF SDLPAVVAEE TAAATGVVAK IDGVGPGWRA LGKDDFTNVN 
CYEDTWTWDG SLVKCTGKPV GVIRSIKPYT NFELVAEWQH LRAGGNSGIF VWASEQALNS 
IKPGQLPPGG IEVQVLDHGY TEQYEKSTGK KADWFTSHGD VFPVGSSKMK PFPPTAPNGQ 
RSFPRKNLSK GINEWNHYYV RAINGEIRLW VNGEEVSGGE KCEPATGFLC LESEGAPVEF 
RNIRIRELP