Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5942 |
Symbol | |
ID | 8887163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 6302973 |
End bp | 6303656 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003514662 |
Protein GI | 291303384 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGGC TGACGAAGGT GACCAAGACC TACCCCGGTG ACGTCACGGC ACTGGACGAG GTGTCGCTGG ACGTCGATCC GGGTGAGCTG GTGGCGATCG CGGGCCCGTC GGGTTCGGGG AAGTCCACCA TGCTCAATGT CATCGGCACC CTGGATCGTT GCAGCTCAGG GGATGTCCGC ATCGCCGGGC ACGACGTGTC CGGACTGTCG GACGCCCAGC TGTCGGCGCT GCGGGCCCGT CACATCGGCT TCGTGTTCCA GCACTTCCAT CTCGCCTCCG GCGTCATGGC ACTGGACAAT GTGGCCGACG GGTTGCTCTA TAGTGGCCAT TCGTTGTCGC GGCGGCGCGA GCTCGCCGAG ACGGCACTGC GGCGGGTCGG GCTGGGTCAC CGGCTCGACC ACGAACCGCA TGAGCTGTCG GGTGGCGAGA AGCAGCGGGT CGCGATCGCC AGGGCGGTCG CGGGCAACCC GCCACTGCTG CTGGCCGACG AGCCGACCGG GGCGCTGGAC TCGGTGTCGG GCACGCAGGT CATGGAACTG CTGCGCGAAC TCAACGACTC CGGCACGACG GTCGTGATCA TCACGCACGA CCGCGAGATC GCGGCCAGCC TGCCCCGGCA GGTGCGGATG CGCGACGGCC GGATCGAGAC GCCGTCGCTG TCGGGCAGGG TGATGACGCC GTGA
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Protein sequence | MIRLTKVTKT YPGDVTALDE VSLDVDPGEL VAIAGPSGSG KSTMLNVIGT LDRCSSGDVR IAGHDVSGLS DAQLSALRAR HIGFVFQHFH LASGVMALDN VADGLLYSGH SLSRRRELAE TALRRVGLGH RLDHEPHELS GGEKQRVAIA RAVAGNPPLL LADEPTGALD SVSGTQVMEL LRELNDSGTT VVIITHDREI AASLPRQVRM RDGRIETPSL SGRVMTP
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