Gene Snas_5942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5942 
Symbol 
ID8887163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6302973 
End bp6303656 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content69% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003514662 
Protein GI291303384 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGC TGACGAAGGT GACCAAGACC TACCCCGGTG ACGTCACGGC ACTGGACGAG 
GTGTCGCTGG ACGTCGATCC GGGTGAGCTG GTGGCGATCG CGGGCCCGTC GGGTTCGGGG
AAGTCCACCA TGCTCAATGT CATCGGCACC CTGGATCGTT GCAGCTCAGG GGATGTCCGC
ATCGCCGGGC ACGACGTGTC CGGACTGTCG GACGCCCAGC TGTCGGCGCT GCGGGCCCGT
CACATCGGCT TCGTGTTCCA GCACTTCCAT CTCGCCTCCG GCGTCATGGC ACTGGACAAT
GTGGCCGACG GGTTGCTCTA TAGTGGCCAT TCGTTGTCGC GGCGGCGCGA GCTCGCCGAG
ACGGCACTGC GGCGGGTCGG GCTGGGTCAC CGGCTCGACC ACGAACCGCA TGAGCTGTCG
GGTGGCGAGA AGCAGCGGGT CGCGATCGCC AGGGCGGTCG CGGGCAACCC GCCACTGCTG
CTGGCCGACG AGCCGACCGG GGCGCTGGAC TCGGTGTCGG GCACGCAGGT CATGGAACTG
CTGCGCGAAC TCAACGACTC CGGCACGACG GTCGTGATCA TCACGCACGA CCGCGAGATC
GCGGCCAGCC TGCCCCGGCA GGTGCGGATG CGCGACGGCC GGATCGAGAC GCCGTCGCTG
TCGGGCAGGG TGATGACGCC GTGA
 
Protein sequence
MIRLTKVTKT YPGDVTALDE VSLDVDPGEL VAIAGPSGSG KSTMLNVIGT LDRCSSGDVR 
IAGHDVSGLS DAQLSALRAR HIGFVFQHFH LASGVMALDN VADGLLYSGH SLSRRRELAE
TALRRVGLGH RLDHEPHELS GGEKQRVAIA RAVAGNPPLL LADEPTGALD SVSGTQVMEL
LRELNDSGTT VVIITHDREI AASLPRQVRM RDGRIETPSL SGRVMTP