| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3167 |
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| Symbol | |
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| ID | 8884366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 3343663 |
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| End bp | 3346422 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_003511931 |
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| Protein GI | 291300653 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0976741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000193784 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAACTC CGCGTCCGCG CGAACGCCCG GCTGACACGG CGGACAAGGG CACCGACTCA
CCGGCGACGC GCTACGCCGC GGCACGCTGG CGGTCGCAGT TCCCTCAGCT CGCCGATTTC
TCCTCCCGGC TGTCCTTCGA CCTGGACGAC TTCCAGATCG AGGCCTGCCA GGGCCTGGAA
CGCGGCTCCG GGGTGCTGGT GTGCGCCCCC ACCGGCGCGG GCAAGACGAT CGTGGGGGAG
TTCGCCGTCC ACCTGGCGTT GTCCAAGGGC CGCAAGTGCT TCTACACGAC ACCCATCAAG
GCGCTGTCGA ACCAGAAGTT CCACGACCTG GTGGCCGTGC ACGGCGCCGA CAAGGTGGGC
CTGCTGACCG GCGACACCGT CATCAACGGT GAGGCGCCGG TGGTGGTCAT GACCACCGAG
GTGCTGCGCA ACATGCTCTA CGCCCGCTCG GCCACCCTGG AGGGGCTGGG CTTCGTGGTC
ATGGACGAGG TGCACTACCT GGCCGACCGG TTCCGCGGCG CCGTGTGGGA GGAGGTCATC
ATCCACCTGC CCGCCTCGGT GAGCCTGGTG TCGTTGTCGG CGACGGTGTC CAACGCCGAG
GAGTTCGCCG ACTGGCTGGT GTCGCTGCGC GGCCACACCG AGGTCGTGGT GTCCGAGCAC
CGTCCGGTGC CGCTGTGGCA GCACATCATG GTGGGCCGCC GCCTGTTCGA CCTGTTCGCC
ACCGAGGGCG ACGACCGCAC CGAGGTGCAC CCGCAACTGA TGCGCCACAT CCGGGAACAG
GAACGCCGCC TGGGCTACGA CCGGCGCGGC CGGATGCGCC GCCCGAGGCC GCCGTACCGC
AGCGACGTGA TCGCCAAGCT CGACTCCGAG GCGCTGCTGC CCGCGATCGT GTTCATCTTC
AGCCGGGCCG CGTGCGACGC GGCCGTCAGC CAGTGCCTGC TGGACGGGCT GCGGCTGACC
GACCCGGGCG AGGAGGCCGA GATCGCCCGC GTCGCCAACG CCCGCGTCGC GCACATCTCC
ACCTCCGACC TCAACGCCCT GGGCTACTAC CCGTTCCTGG ACGGGCTGCA ACGCGGCCTG
GCCGCCCACC ACGCGGGCCT GTTGCCGGTG TTCAAGGAGA TCGTGGAGGA GCTGTTCGCC
GCCGGCCTGG TCAAGGTCGT GTTCGCCACC GAGACCCTGG CGCTGGGCAT CAACATGCCC
GCCCGCACCG TGGTGCTGGA GCGGCTGGTC AAGTACAACG GCGAGGAACA CGTCGACCTG
ACGCCGGGGG AGTACACCCA GCTGACCGGC CGGGCCGGAC GACGCGGCAT CGACATCGAG
GGCCACGCGG TCACCATCTG GGGCGCCGAC GTCGACCCCC GGCACGTGGC GGGCCTGGCC
TCGACGCGCA CCTACCCGCT CAACTCCAGT TTCTCGCCCT CGTACAACAT GGCGATCAAC
CTGATCGCGA CCCTGGGCAC CGACAAGTCC CGGGAGTTGC TGTCGTCGAG TTTCGCGCAG
TTCCAGGCCG ACCGCACCGT GGTGGGCCTG GCCGAGCAGG CCCGCGCCGC GCGCCGCGCC
GCCGGCGAGT TCGACCCGTT GATCTCGTGC GACCGCGGCG ACTTCGAGGA GTACTTCGCG
TTGCGCATGG CCGCCACCGA CCGCGAGAAA CGCGCGTCGC GGCAGCGCAA GGCCGACGCC
CGCACCGACG CGCGCGCCTC ACTGGCGCGA CTGCGCGTCG GCGACGTCAT CCGGATCCCG
GCCGGTCGCC GCGCGGGCCT GGCCGTCGTG CTGGATCCCG GTCTGTCCCG GGCGGGCCGC
GACGGCGAGC AGCGTCCGCT GGTGCTGACC GAGGCCCGCT GGGCTGGCCG GCTGGCCGGT
TCGGCGTTCC CGCAGGCGGT GGAGGCGCTG GCGCGCATCA AGGTGCCCAA GCACTTCAAC
CACCGCAACC CGGCGCTGCG GCGTGACCTG TCGGCGGCGT TGCGGGCCGC GGCGGCCACG
GCACCCGGCG CGGTGGAACG CGGCCGTCGG CGCCGCGCCG GTGACGACCC GGAGCTGGAG
AAGCTGCGGG CCCAGTTGCG GGCGCACCCG TGCCACGAAT GTCCCGACGT CAACGAGCAC
GCCCGCCAGG CCAACCGCAG GCAGCGGCTG CTGTCGGACT ACGAGCGGCT GCAAACGAAG
GTCAACCGCC GGTCGGGTTC GCTGGCGCGC ACCTTCGACC GGGTGCGGGA CATGCTCAGC
GACTACGGGT ACATCGCCTC GGGCACCGTC ACCGACGCCG GGCGGGTGCT GTCGCGGATC
TGGTCGGAAT CGGACCTGCT GGTCGCCGAA TGCGTCCGCG AGGGCGTGTG GGACGGCCTG
TCGGCACCGG AACTGGCCGC GGTGGCCAGC ATCGTTTTGT ACGAGTCGCG GCGTGACGCC
GACATGTCAC CCGCGCTGCC CAAGGGCAAT GTCGCCTCGG CGGTGGCCGC GACGCTGCGA
CGGTTCGACG CCATCCACGC CGACGAGTCG AGGCACGGCC TGAGCCTGAC CGGCGAACCC
GACCTGGGGT TCGTGTGGCC CATGTACCGC TGGGCGCGGG GCGAACCTTT GGCCAAGGTG
CTGGCCGCCG GGGACGGCCC CGACGGTTCG ATGCCCGCCG GTGACTTCGT GCGCTGGGCT
CGCCAGACCA TCGACCTGTT GGGGCAGTTG GCTTCGGCGG CGGGCCCGTC CTCGCCGCTG
TACTCGACGG CGCTGGCGGC GGCCGACGCC GTGCGCCGGG GCGTGGTCGC CGACAGTTGA
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| Protein sequence | MTTPRPRERP ADTADKGTDS PATRYAAARW RSQFPQLADF SSRLSFDLDD FQIEACQGLE
RGSGVLVCAP TGAGKTIVGE FAVHLALSKG RKCFYTTPIK ALSNQKFHDL VAVHGADKVG
LLTGDTVING EAPVVVMTTE VLRNMLYARS ATLEGLGFVV MDEVHYLADR FRGAVWEEVI
IHLPASVSLV SLSATVSNAE EFADWLVSLR GHTEVVVSEH RPVPLWQHIM VGRRLFDLFA
TEGDDRTEVH PQLMRHIREQ ERRLGYDRRG RMRRPRPPYR SDVIAKLDSE ALLPAIVFIF
SRAACDAAVS QCLLDGLRLT DPGEEAEIAR VANARVAHIS TSDLNALGYY PFLDGLQRGL
AAHHAGLLPV FKEIVEELFA AGLVKVVFAT ETLALGINMP ARTVVLERLV KYNGEEHVDL
TPGEYTQLTG RAGRRGIDIE GHAVTIWGAD VDPRHVAGLA STRTYPLNSS FSPSYNMAIN
LIATLGTDKS RELLSSSFAQ FQADRTVVGL AEQARAARRA AGEFDPLISC DRGDFEEYFA
LRMAATDREK RASRQRKADA RTDARASLAR LRVGDVIRIP AGRRAGLAVV LDPGLSRAGR
DGEQRPLVLT EARWAGRLAG SAFPQAVEAL ARIKVPKHFN HRNPALRRDL SAALRAAAAT
APGAVERGRR RRAGDDPELE KLRAQLRAHP CHECPDVNEH ARQANRRQRL LSDYERLQTK
VNRRSGSLAR TFDRVRDMLS DYGYIASGTV TDAGRVLSRI WSESDLLVAE CVREGVWDGL
SAPELAAVAS IVLYESRRDA DMSPALPKGN VASAVAATLR RFDAIHADES RHGLSLTGEP
DLGFVWPMYR WARGEPLAKV LAAGDGPDGS MPAGDFVRWA RQTIDLLGQL ASAAGPSSPL
YSTALAAADA VRRGVVADS
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