| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1886 |
|---|
| Symbol | |
|---|
| ID | 8883078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 1978297 |
|---|
| End bp | 1980762 |
|---|
| Gene Length | 2466 bp |
|---|
| Protein Length | 821 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003510675 |
|---|
| Protein GI | 291299397 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0637904 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAGG CGATGCTGCG GGACCTGGCC GCCCACAAGG CGCGGGTCGC GATGACCCTG
GTGGCCATCG CTTTGGGGGT GGCGGCGGTG GTGGCCAGTT GGATCGCGTC GGAGTCGATC
CCGTCCGGCC TGGTCACCTC GCAGGTCAAC TCCCGTGTGG ACGTGTCGGT GCGCGGGGAG
CTGTCCACCG CCCAGGTCGA GGCGTTGCGA CAGCTGCCCG GTGAGGCGAC GGTGGTGAGC
ACGTTCCGGG CCGGGGTGGT CGCCGAAGAC GGCAAACTCG TCGACGCGAC GACCGTGTTC
GACCACGCCG GAACCGGTTT CGACGACTCC GGACGGTTCG ACCTGAAGGC GGGCAAGGCG
CCCAGCGGTG GCGACGAGAT CGCGCTGCGG GCCGCCGAGG CGAAGTCGGC CGGGCTGCGG
GTCGGCGATG CCGCCTCGAT CCTGTTGGCC GACGGGGAAC GGGTGGAGCT CAAACTCACC
GGCGTGTACG ACTACCGGCC GCTGTGGACG GATGACAAGG ACCCGGCGCC GGTGGTGGCC
TTCGGCGACG CGTCCGGCGT GGATGCCACG GTGGCGCGGG TCGACCTGAC CGGCGGTGCG
GGACTGGAAT CGACCGCCGT GGACGCGGTG CGCGAGAACG CTTCGGACTC GATCGGCCGA
CGTGTCGAGG TCGCCGACGC GCGCGAACTG GCCGAGGCCA CCCGCGCCGA ACTCGCCTCC
GACCTGTTCG ACCTGCGCAT GATGCTGCTG CCGTTCGCGG GCCTGGCGCT GCTGGTGGGG
ATGTTCATCA TCGCCAACAC CTTCGCCATG CTCGTCAGTC AGCGGACCCG GCAGCTGGCG
CTGCTGCGCG CGGTCGGCGC CAAACGCGGC CAAGTGCGGC GGACGGTACG GCTGGAGGCA
CTGGTGCTGG CGGTGGTCGG CGGAACGATC GGGACGCTGG CCGGGATCGC CGCGGCTCCC
GCTCTCATCG GGATGAACTC CAGCGAGCAG GTGCCGCTTG TGGTGTCGCC CTGGGGAATC
GCGGTGGGGC TGGGTTGTGC CGTCGCGGTC ACGGTTCTGG CCTCGGCCGG TGCCGCCCGC
AAGGCCGCGT CGGTGGCGCC GATGGCGGCG CTGCGGGTCG CGGCCCGGAC CGCCACCCAG
ACCCGTGGGC GTCGTGTCTA TATCGGACTC GGGCTGTTGT TGGCCTCGGT GGTGACGGTC
GGGGTCACGG CCGATCCCAC GGCGGGAACG ACGAAGCGGG TCATCGCGAT GTGCGCGGCG
GGACTGGGCG CGGTGGCCGT GCTGGTGCTG GCCCCGAGTC TGCTCAACCT GGTGCAGCGG
CCACTGCGGG CGCTGGCGGG ACGCTCGGGA CCGGCCGCGC GGTTGGCGAT GCGTTCGGCC
GCAGCCGATC CGCGCCGCAC CGCCGGGACA TCCGGGGCCA TCACGATCGG GCTGATCCTG
GTGTGCGCCT TCGCGACCCT GAACGCGACG CTCGGCGACC TGATCGCGTC GACCGTTCGC
GACGGCGTGC CGACCTCGAC GACGGTGCTG GAGGCGGCGG GCGGTCAGGG CGCGACCCTG
ACCCGCGACG AGGTCGACAA GGCCAAGGCC GTCGCGGGCG TGTCCATGGT GGAACCCGTC
AGTCAGGCGA TAGCCACACT GGAGTACCCG GGCGGTTCGG CGCGTCGCAA CGTCTCGGCC
GTCGATCCCG AGGCGCTGGG GACGGTACTG ACTCCGAGGA TCACCGAGGG CAGCGACGAC
CTGCGCGAGG GCTTCGTCAT CGCGCAGAAC CAGGCCACCA CGCTCGGCCT GGCGGTGGGG
GACCGGCTGA CGGTTCGGCT GGAACTCGGC GGCGAGATCA CGGCTCGCGT CGCCGGGGTC
TACGAGGCCA CCGAGTACTC CGCCAGTGTC TATGTGGATG CCGACCGGGT GCCGGAGAAG
GCGCGGGAGG GCATCACCGG CGTCTATGTC ACCGGAGCCG ATCCGGCGGC GGTGAAGTCG
GCGCTGCGCG ACACCTTCGC CGAACGTCCG GACGTTCGGG TCTCGGACCA GCGCTCGCTG
GTGGCCGAGG CTGTCGAGCG GCAGCGGATG GCGTTCGTGG CCTTCTACGC GATGTTCGGG
CTGGCGCTGC TGATCGCGTT GTTCGGCGTG GTCAACACGC TGACGTTGTC GGTGATGGAG
CGGATCCGTG AGCTGGGGGT GCTACGGGCG ATCGGCGCGA ACGCGAAGCT GGTGCGGCGG
ATGGTGCGGG TCGAGAGCCT GGTGATCGCG CTGTTCGGTT CGGTGCTGGG CATCGTGGCC
GGAGTGGGCG TGGGCGCGGT GATGCAGCAA GCGATGTTGG GCCAAGCACT GTGGACGTTC
ACGGTGCCGT GGGATGCCGT CGGGCTCAGC CTCGTGGGGA CCGTGGTCGC GGCGGTGCTG
GCGGCGATCT GGCCCGCGCG TCGTGCCGCC CGAGCCGATC CACTGGCGGC GATCGCCGCC
GAGTGA
|
|---|
| Protein sequence | MRKAMLRDLA AHKARVAMTL VAIALGVAAV VASWIASESI PSGLVTSQVN SRVDVSVRGE
LSTAQVEALR QLPGEATVVS TFRAGVVAED GKLVDATTVF DHAGTGFDDS GRFDLKAGKA
PSGGDEIALR AAEAKSAGLR VGDAASILLA DGERVELKLT GVYDYRPLWT DDKDPAPVVA
FGDASGVDAT VARVDLTGGA GLESTAVDAV RENASDSIGR RVEVADAREL AEATRAELAS
DLFDLRMMLL PFAGLALLVG MFIIANTFAM LVSQRTRQLA LLRAVGAKRG QVRRTVRLEA
LVLAVVGGTI GTLAGIAAAP ALIGMNSSEQ VPLVVSPWGI AVGLGCAVAV TVLASAGAAR
KAASVAPMAA LRVAARTATQ TRGRRVYIGL GLLLASVVTV GVTADPTAGT TKRVIAMCAA
GLGAVAVLVL APSLLNLVQR PLRALAGRSG PAARLAMRSA AADPRRTAGT SGAITIGLIL
VCAFATLNAT LGDLIASTVR DGVPTSTTVL EAAGGQGATL TRDEVDKAKA VAGVSMVEPV
SQAIATLEYP GGSARRNVSA VDPEALGTVL TPRITEGSDD LREGFVIAQN QATTLGLAVG
DRLTVRLELG GEITARVAGV YEATEYSASV YVDADRVPEK AREGITGVYV TGADPAAVKS
ALRDTFAERP DVRVSDQRSL VAEAVERQRM AFVAFYAMFG LALLIALFGV VNTLTLSVME
RIRELGVLRA IGANAKLVRR MVRVESLVIA LFGSVLGIVA GVGVGAVMQQ AMLGQALWTF
TVPWDAVGLS LVGTVVAAVL AAIWPARRAA RADPLAAIAA E
|
|---|
| |