Gene Snas_1584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1584 
Symbol 
ID8882773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1662183 
End bp1662782 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content62% 
IMG OID 
ProductRNA polymerase sigma-24 subunit, ECF subfamily 
Protein accessionYP_003510380 
Protein GI291299102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTTC CAACGGACCA CCCCGACTCT CCCGAGGCCA AGCGCTACGC GGACGCGTTG 
CGCGGGGCCC GGGAGGGCTC ACCACACGCC CTCGATGACG TAATAGCCGA ACTGTCACCA
ATGTTGTGGC GAGTCGCCCG GGCCTGCGGC CTTGACCGGC AACTCGCCGA GGACGTGGTG
CAGACGACCT GGCTGGCACT GATCAAATCG GTGTCGACCA TTGAGAAACC CGCCGCGTTG
CCGGGCTGGC TCGCCAGCAC TGCCAAACGC GAATCATGGA AGGTTGGTCG CGGTCAGAAG
CGTGAGAACG CTGTTGATCA GGAGTGGGAT GGCCTGATCG CCGACCAGCT CGATCTGGAT
GAGGATGTCG CGGACCGTAT GGGTCTGGCA CCTCGCTACA ACTTGTTGTG GCGGTCGATC
GGCCAACTTT CGGATGTTTG CCGGGCTTTG ATTCAGGTCA TCGCCTACAT GGATCGGCCG
AACTACGACC AGCTCGCCAC CGCGCTGGGG ATACCTCGCG GGTCCATCGG ACCCAAGCGA
GGCCGTTGCC TGGCGGAGCT GCGTAAACGC CTCCACTCGG ATCCAGAGTG GAAATATTGA
 
Protein sequence
MTVPTDHPDS PEAKRYADAL RGAREGSPHA LDDVIAELSP MLWRVARACG LDRQLAEDVV 
QTTWLALIKS VSTIEKPAAL PGWLASTAKR ESWKVGRGQK RENAVDQEWD GLIADQLDLD
EDVADRMGLA PRYNLLWRSI GQLSDVCRAL IQVIAYMDRP NYDQLATALG IPRGSIGPKR
GRCLAELRKR LHSDPEWKY