| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1247 |
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| Symbol | |
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| ID | 8882433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 1321731 |
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| End bp | 1323215 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003510050 |
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| Protein GI | 291298772 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.350307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTACCA AGAACCTCAT ACCTCCCATG GTGGTGATCA CCGTGCTGGC CACGGGATTC
ACCGCCGGAG TCGCCCAGTC CGAACCCGGT CAACCGTCCA CCGTCGAGGC CACCGCCCCC
ATCGCGGGCG ACGAGGCGAT CCTGCACCTG TTCCAGTGGC CGTGGAAGTC GGTGGCGTCC
GAGTGCACCA ATGTGCTCGG TCCGGCGAAG TTCCCGGCCG TCGAGGTGTC CGCGCCTCAG
GAACACGTCG TGCTGCCCGA CAAGCAGTAC CCGTGGTGGC AGGACTACCA GCCGGTCAGC
TACCAGCTCG AATCGCGGCG CGGTTCGGCC AAGGACTTCG CCGACATGGT GTCCGCCTGC
GACGACGCGG GCGTGGAGGT CTATGTGGAC ACGATCGTCA ACCACATGGC CGGTGGCGCC
TCCACCGGGA CCGGCAGCGG CGGCAGCGAG TACTCCCAGT ACGACTACCC CGCGGTCCCC
TACGGCAACA ACGACTTCCA CCACTGCGGC CGCAACGGCA ACGACGACAT CCAGAACTGG
CAGGACCAGT GGGAAGTCCG CAACTGCGAA CTGCTCGACC TGTCCGACCT GGCCACCGAG
ACCGAACACG TCCGAAAGCA ACTCACCGGC TACATGCAGG ACCTCATCGA CCTGGGTGTC
GACGGCTTCC GCATCGACGC CGCCAAACAC GTCCCGGTCG CCGACCTGGA GGCCATCTAC
GGTGGACTGA CCGGCGACCC GAAGATCTTC CAGGAGGTCA TCGAGGGCGG CAACGGCGAG
ATCAGCCCGA ACGAGTACAA GGGACTGGGA CGCGTCACCG AGTTCCGCTA CGGCGACCAG
GTCGGCGCCC GGTTCAAGGA CGGGCAGCTG TCGGCGCTGA AGGACTTCCA AAGCCAGATG
CTGCTCGACT CGTCCGCCGC CACCACCTTC ATCGACAACC ACGACACCCA GCGCAGCGGC
CGCGCTCAGC TCACCTACAA GAACGGCGCC CGCTACTACA TGGCCGAGGC GTTCGCGCTG
GCGCACGGCT ACGGCTCCCC GCACATCCTG TCGGGCTTCG CGTTCGACAA CGCCGACGCC
GGGCCACCGG CCGAATCGGA CGGAACCACC AAGCAGGCCG TGGCCGACGA CGGCGCCTGC
GCGTCCGGCT GGGAGTGCTC GCACCGGCAG CGCGCCGTGC TCAACCTGGG CGCGTTCCGC
ACCGCCGCGG GCGACGCGGC GGTGACCGAC TGGTGGTCCA ACGGTTCCGA CCAGATCGCC
TTCGGACGCG GTGACCGGGC CTTCGCGGCC TTCAACGCCT CGGGTTCCGC ACTCACCACC
GAGTTCGCCA CCGCCCTGCC CGACGGCGAG TACTGCGACG TGGCCAACGG CGACCACACC
GACGGCGCCT GCGACGGTCC GGCGTACACC GTGTCGGGCG GCAAGCTGAC GGCGACGGTT
CCGGCCAACG GCGTACTGGC GGTGCACGTG AACGCCGCTA TTTGA
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| Protein sequence | MRTKNLIPPM VVITVLATGF TAGVAQSEPG QPSTVEATAP IAGDEAILHL FQWPWKSVAS
ECTNVLGPAK FPAVEVSAPQ EHVVLPDKQY PWWQDYQPVS YQLESRRGSA KDFADMVSAC
DDAGVEVYVD TIVNHMAGGA STGTGSGGSE YSQYDYPAVP YGNNDFHHCG RNGNDDIQNW
QDQWEVRNCE LLDLSDLATE TEHVRKQLTG YMQDLIDLGV DGFRIDAAKH VPVADLEAIY
GGLTGDPKIF QEVIEGGNGE ISPNEYKGLG RVTEFRYGDQ VGARFKDGQL SALKDFQSQM
LLDSSAATTF IDNHDTQRSG RAQLTYKNGA RYYMAEAFAL AHGYGSPHIL SGFAFDNADA
GPPAESDGTT KQAVADDGAC ASGWECSHRQ RAVLNLGAFR TAAGDAAVTD WWSNGSDQIA
FGRGDRAFAA FNASGSALTT EFATALPDGE YCDVANGDHT DGACDGPAYT VSGGKLTATV
PANGVLAVHV NAAI
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