Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0541 |
Symbol | |
ID | 8881724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 572638 |
End bp | 573303 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003509348 |
Protein GI | 291298070 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.318618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGAAC CGCTGCGCCT CCTGGTCGTC GACGACCAGA CGCTCGTCCG CGAGGCCCTC GCCGGACTCC TCGACGCCGA ACCCGAGTTC ACCGTGGTCG GACAAGCCGC CGACGGCTCC GAAGTCCCCG CACTGGCCCG CGACAGCGAC CCCGACATCG TCATCATGGA CGTCCGCATG CCCGATGTGG ACGGCGTCGA GGCCACCGCC CGACTGACCC GCGAACGCCC ACAGTCGAAG GTCATCCTCC TGACCACCTT CGACGTCGAC GCCTACGTGT ACGCGGGCCT GCGAGCCGGA GCCAGCGGCT TCCTCCTCAA GGACTCCCAC GCCGCCACCC TGATCGCCGC CGTCCACACC GTCGCCTCCG GCAACGCGGT GCTCTCCCCT TGGGCCACTT CACGACTGGT GTCGACCTTC GCCCCGCTGC TGCCGGAACC CCTGGCCACA CCCCCGCGAC TCAAAGCCCT CACGGCCCGC GAACGCGACG TCCTGTCACT GACCGGCCGG GGCCTGTCCA ACAACGAGAT CGCCACCGAA CTCGGCATCG GCTACGAAAC CGTCAAGAGC CACCTCAGGT CCGTGATGAC GAAACTGCGG CTGCGCGACC GCGTCCACGC CGTCATCGTC GCCTACGAGA CCGGCCTGCT GCGCCCGTCC GAATGA
|
Protein sequence | MDEPLRLLVV DDQTLVREAL AGLLDAEPEF TVVGQAADGS EVPALARDSD PDIVIMDVRM PDVDGVEATA RLTRERPQSK VILLTTFDVD AYVYAGLRAG ASGFLLKDSH AATLIAAVHT VASGNAVLSP WATSRLVSTF APLLPEPLAT PPRLKALTAR ERDVLSLTGR GLSNNEIATE LGIGYETVKS HLRSVMTKLR LRDRVHAVIV AYETGLLRPS E
|
| |