| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0222 |
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| Symbol | |
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| ID | 8881400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 235772 |
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| End bp | 238528 |
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| Gene Length | 2757 bp |
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| Protein Length | 918 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003509034 |
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| Protein GI | 291297756 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.847237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCC CAGCACCGGC TTCGGCGCCG CCGCGCGCCG ACGTCCTGGC CGAACTCCGC
TCCACCCTGG AGCGGCACCA TCGGGTGGTC GTGCGCGGCC CGGCGGGGGT CGGCAAGTCG
GTGCTGCTCG ACCGACTTAA GTCCGAATGG GACGGTGACG TGGTGCTGGC GGCGTACCCG
GGTCGCACCG GTGTGCCGTT CGCGACGCTG GCGGAGCTGT TCGCCGACGT CGAAGCCGGT
TGGCTCGACG CACTGACGCC GCCGCGACGG GCCGCCGTCG AGACGCTGCT GCGGTTGCGG
GAGGCGCCCG AGAGCGGACT GGACCTGATC GGACTGCGGC TGGCGCTGCG GGAACTGCTG
CGGCGCGTCA CCGCCGCGAA CCGGGTGTGG TTCGTCGTCG ACGCCGCCGA GCGTTGCGAC
GAGCAGAGCC TGGACCTGCT CATCGGCCTG TGGCGCCATC TTCCCGCGCA CCGTGTGCGG
GTGCTGCTGT CCACACGCGA CGCCGAACTG TCGGGGCGGC TGGCCGGAAC CGGCGCGCGC
GAGATCGCCG TCCCACTGTG GAGCAGCACC GAGATCCGGG AGCTGCTCGC TCCGCTGGCG
TTGCCGCACC GGCAGGTCTC GCAGGTGTGC CGGGCCAGCG GCGGACTGCC GGGGCTGGCG
AGCCGGATCG GCGAGGCCCT GGCCGCCGCG CCGGGCGACG CGGCCGACCA CCGCACGGCG
ATCCTGCCGC TGGCCGAGGC CGTCACCGGC GAACTGCTCA CCGAGCTGTC ACCGCGCGCC
CGCAACACGA CCCTGGTCGC GGCGCTGGCC ACCCACGCCA CCGAGCGGCA GTTGCGGCAG
GCCGGTTGCG GGTCGGCGCA TCGCGACCTC GCCGAGGCGG TCCGGCTCGG CCTGGTCGAG
CTCACCGAAA CCGGCGAGGT CGCCTTCCAC GCCGAGGCGA TTCGGGACGC GTTGGTGGCC
AAGGCATCCG AGCGCACCAT CCGGCGCGTC CACCGGACAC TGGCGCAGGT GGTGACCGAC
CCGGTGGCCT CGGTGCGGCA CCGCGCGCTG GCGGCGGACC GTCGGCAACC GGAGCTGGCG
TCCGAACTGG ACAAGACCGT GCCGGTCGCG CAGCGCACCG GCGAGGTGGC GCTGGCTGCG
GAGCTGGCGC TGATGGCCGC CGAGCTGACG CCGTCCGACG ACACCGCCGC CCTGATCCGG
CGCTGGCTGA GCGCCTGCCA GCACGCGGGT TCGGCCGGTC GGGTCGACTG GGTGGAACGC
GCCGCCAAGG CCGTGTGCGA CCTGTCGGAG GACCCCAACG ACCGGCTCCG GGCCCGGATG
GCGGTCATCG ACGCGGTCGG GCAGGACTTC GGGAAGGTGC GCCAGACCTT CGCCGCCGCC
GAGTCCGAGG CGCGCGGCGA CAACCGCACC GATCCCGGCC TGCACGCGGA ACTGCTGACC
TGGATGGCTT GGCGCACCTA CGTCTGCGAC ACCAATCCGT CCGAAGTGCT GTCGCTGTCG
CGCCGGGCGG CGGTACTGGC CGAACGGGGC GGGAACTCGC TGGTCCACAT GCAGGCGTTG
ACGATGGTGG CCCGGATGCA GCGGTTCCTG GGGCTGCCCG GGGACGAGAC CACGCTGCGC
CGGGCCGTCG CCGTGGCCCC GCTGCCGGTC CGCGACGTCG CCGGTTCGGC GAACTTCCTG
CGGGCCCGGC ACGCGCTGTT CGACGACCGG CTCGACACCG CCCGGGAACA GTTCACCGAA
CTGCTGTCGC TGGCGGAACG GTTGGGGGAA CTCAAGAGCC TCACCGAGGT GCTGCGCAGC
CTGGCCGAGG TCGAGCTACG GGGCGGCGAC TGCCAGGCCG CCCGCGCGCA CATCGCCCGC
GCCATGGACC TGCTGGCCGG AAGCGATCTG TCGCCCAGCC CGGTCTGGTA CGTGGCCGCG
CTGGTGGAGA CCCACGCCGG GGACCGGGAC CGGGCGATGA TCCTGGCCCG GCAGGGCCTC
GCCTCGGCCC GCGAGGACAA CGACGTCGTG TTCACCGCCC GCAACGAGTA CGTGCTCGGG
CTGCTGCGGC TGTACCGGGG GCACGCCGAG GCGGCGGTGC GCAGCCTGCG GGAGACCGCC
GCGCTCGACG ACCGGTGCGG GGTCACCGAT CCGTCGCCGC TGCCGTTCCA CGGCGACCTC
GCCGAAGCGC TCGTCCACAC CGGACAGAAC GAGGCGGCGC TCGCGGTGCT GAACCGGGCC
CGCGACACCG CCACCCGACT GGGCAGGCAC AGCGTGCTGC CGCGGCTGGA CCTGGCGGAA
TCGGCGCACC GCATCGCCGT GGGCGATCAC CAGGCGGCCG CGGTGCTGTT GAAGCGGGCG
CTCACGGAGT TCACCCACTA TGGACTCCAA CTGGAGCGGG GCCGGACACT GCTGGCCACC
GCGTCGCTGG AACGCCGCCG CCGCAAACGC GCCCGCGCCC GGGAGCTGCT GACCGAGGCC
GCGACCCTGT TCGCCGAATG CCAGGCCACC CCGTGGCGAC GGCAGGCCGA GACGGCTCGC
GCGCAGCTGG AGCACCAGCG GCATGGGGCG CCGGACGAGA TCGCGGCGCT GACGGCGGGT
GAGAGCCGGG TGGTGCGGCT GGTGGCCGAG GGGGCGACCA ACCGGCAGGT GGCCTCGACG
CTGGACGTCA GCGTCAAGAC CGTCGAGGCG AGCCTGACGC GGATCTACCG CAAGCTGGGC
ATCCAGACCC GCACCCAACT GGCCGGGTAC CGACGGCCCG ACGAGCCCGG GGCGTGA
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| Protein sequence | MATPAPASAP PRADVLAELR STLERHHRVV VRGPAGVGKS VLLDRLKSEW DGDVVLAAYP
GRTGVPFATL AELFADVEAG WLDALTPPRR AAVETLLRLR EAPESGLDLI GLRLALRELL
RRVTAANRVW FVVDAAERCD EQSLDLLIGL WRHLPAHRVR VLLSTRDAEL SGRLAGTGAR
EIAVPLWSST EIRELLAPLA LPHRQVSQVC RASGGLPGLA SRIGEALAAA PGDAADHRTA
ILPLAEAVTG ELLTELSPRA RNTTLVAALA THATERQLRQ AGCGSAHRDL AEAVRLGLVE
LTETGEVAFH AEAIRDALVA KASERTIRRV HRTLAQVVTD PVASVRHRAL AADRRQPELA
SELDKTVPVA QRTGEVALAA ELALMAAELT PSDDTAALIR RWLSACQHAG SAGRVDWVER
AAKAVCDLSE DPNDRLRARM AVIDAVGQDF GKVRQTFAAA ESEARGDNRT DPGLHAELLT
WMAWRTYVCD TNPSEVLSLS RRAAVLAERG GNSLVHMQAL TMVARMQRFL GLPGDETTLR
RAVAVAPLPV RDVAGSANFL RARHALFDDR LDTAREQFTE LLSLAERLGE LKSLTEVLRS
LAEVELRGGD CQAARAHIAR AMDLLAGSDL SPSPVWYVAA LVETHAGDRD RAMILARQGL
ASAREDNDVV FTARNEYVLG LLRLYRGHAE AAVRSLRETA ALDDRCGVTD PSPLPFHGDL
AEALVHTGQN EAALAVLNRA RDTATRLGRH SVLPRLDLAE SAHRIAVGDH QAAAVLLKRA
LTEFTHYGLQ LERGRTLLAT ASLERRRRKR ARARELLTEA ATLFAECQAT PWRRQAETAR
AQLEHQRHGA PDEIAALTAG ESRVVRLVAE GATNRQVAST LDVSVKTVEA SLTRIYRKLG
IQTRTQLAGY RRPDEPGA
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