| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_0116 |
|---|
| Symbol | |
|---|
| ID | 8878183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 92704 |
|---|
| End bp | 93420 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | RNA methyltransferase TrmH family, group 3 |
|---|
| Protein accession | YP_003505917 |
|---|
| Protein GI | 291294519 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.328344 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.298059 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGATCT ATGGGCGCAA TCCGGTCTTG GAGGCCTTGC GCGAAGGCCG GGTGGAGCAG
GTCTGGGTAG CCAGGGGTGT GGAAGCCTGG CTTTTGAAAG AGCTGGACAA ACTGGGGGCT
TCGTACCAAA CAGTACCGCG CATCCAACTC GATCAGATGG TGCGCACCAC CCAGCACCAA
GGGCTGGTGG CCGAGATTAC AGAACTTGCC TACGCCGACC TCGAGGCCCC TTTTCGGCTG
GCCAAAGAGC GCGGCGAGCG GGTCTTGTTG GTGGTGCTGG ACGGCATCAC CGACCCTCGC
AACTACGGGG CCATCATCCG CAGTGCTTTT GCCCTGGGGG CGCATGGGGT GGTGACCGAA
GAACGCCGGA GTGCGCCGCT GTCTGCCCTG GTAATGAAGG CTTCAGCGGG CACAGCCAGT
AAGATACCTT TGGTGCAGGT CAAAAACATT CCGCGCTACC TCGAGCAGCT CAAACAGCAA
GGGATCTGGG TCTATGGCAC CAGCGGCAAA GCTAGCAAAA CCATTGCCGA ACTCGACTAC
CAGCGCCCCT TGGCCCTTGT AATCGGCTCC GAGGGCGAGG GTATGCGCCG GCTGGTGGCC
GAACACTGCG ACGAACTAGC CAGAATCCCC CTCTCTGAGG GGGCTGAGAG CCTGAACGCG
GCGGTTGCGC TGGGGGTGGT GTTGTACCAA GCAGGAATCA ACCGTAGACC AAAATGA
|
|---|
| Protein sequence | MLIYGRNPVL EALREGRVEQ VWVARGVEAW LLKELDKLGA SYQTVPRIQL DQMVRTTQHQ
GLVAEITELA YADLEAPFRL AKERGERVLL VVLDGITDPR NYGAIIRSAF ALGAHGVVTE
ERRSAPLSAL VMKASAGTAS KIPLVQVKNI PRYLEQLKQQ GIWVYGTSGK ASKTIAELDY
QRPLALVIGS EGEGMRRLVA EHCDELARIP LSEGAESLNA AVALGVVLYQ AGINRRPK
|
|---|
| |