Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2029 |
Symbol | |
ID | 8807804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 2148430 |
End bp | 2150106 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | choline/carnitine/betaine transporter |
Protein accession | YP_003461256 |
Protein GI | 289209190 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAACG TCGCGACCCG AGGACCCTTC AAGGGGCTGA ACCCGCGTGT GGCCCCGATC GCGCTGCTGC TGGTGGTGCT GATCGCGCTG TTTGCGATCT ACCGCACCGA GCAGCTCGAA CGGGTCGTCT TTGATACCCG CGCCTTTCTG ACACCCTTTC TCGAGTGGTA CTACGTGGTC GCGATGGCCC TGTTCCTGGT CATCGTGATC TGGCTGGGGG TCGGGCGTTA CAAGAACGTG CGCCTGGGGC GCGACGACGA GGTACCGGAG TTCACCACGG TGTCGTGGCT GGCGATGCTG TTCGCCGCCG GCATGGGCGT GGGCCTTCTG TTCTGGGCGG TGGCCGAGCC GCTCAGCCAC TACGGGGGCA ACCCGTTCCT GCTGGACAAT GGCGAGACGG CCGAGGCCGC CGACATGTCC ATGGTGCTGA CCTATTTTCA CTGGGGTCTC AATGCCTGGG CGGTGTTTGC CCTGCTGGCG CTCATCCTCG CCTATTTCGG CTTCCGCAGG GGGCAACCGC TGGCGCTTCG TTCCGCGCTG CATCCCCTGA TCGGAAAGTA CAGCCATGGC TGGCCCGGCG ATATCGTGGA TCTGCTGGCC ATCCTCGCCA CCGTGTTCGG GATCGCGACC ACCCTGGGGC TGGGTATTCA GCAGCTGGAC ACCGGGTTGG TGCATACCCT GGGGATTTCC GGCGGCGAAA ATGGACAGCT GTTCCTGGCG GCGCTGCTGA CGGTGATTGC GATTGTTTCG GTGATTACCG GTGTTCAGGT CGGCGTGCAG CGGGTCTCGC AGGCCAATAT GTGGCTGAGC GTGGCCCTGA TGGGACTGCT GCTGATATGG GGGCCGACCC AGTACCTGCT GGCGTTGTTC GTCCAGTCCT CCGGCAGCTA TTTGCAGAAT CTGCTGGGGC TTTCGCTGTA CACCCACGCC CATCAGACGG ATCCCTGGCA CTCCGACTGG ACAGTGTTCT ACTGGGGCTG GTGGCTGGCC TGGGCCCCGT TCGTCGGGCT GTTTATCGCG CGCATCTCGC GCGGGCGCAC GCTGCGCGAA TTCGTCCTGG GCGTGTTGCT GGTGCCCACG GTTATCACCT TTTTCTGGCT GTCCATGCTG GGCGGTACAG CCCTGTACGC GGAGGTCAAC GGGGTCGCGG ACATTGCCGA CAAGGTCTCC GAGGACCTGA CCATGGCGAC CTTTGCGACC ATGGACACGC TGGAGCCCTG GCTGGTGGCG AAGATCGGGG GCGGGCTGAT CACGATCCTG ATCGCCACCT ACCTGTTGAC CTCGGCCAAC GCCGGGATCG TCGTGATCAA CACCCTGCTG GCTCACGGTT CTACCGTGCA TCGCAAGCGG CACCTGACCA TCTGGGGTGC CCTGATTGGC CTGATCACCG CGGTGCTGTT GCTGGCGGGC GGGCTGGAGG TCCTGCAAAG CGCGGTGATC CTGGCCGCCC TGCCATTTTC GCTGGTGATC CTGATGATGA TCGTCGGGCT GATCCGGGGG CTGGAGCAGG AACGCTGGGC CCCACGCCCG GGCGAGCGGA CGGTTCTGCC CAGCGAGCCC TGGCAGGTTC CGGCGGATCG CATGAACGAG GACTATGACA GCGAGGATGA TGCGCCCGAA TCCGGCCCGG ACGATGACGG CAAGGACGAG CGCGAGCCAC CGCCACGGCC GTGGTGA
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Protein sequence | MYNVATRGPF KGLNPRVAPI ALLLVVLIAL FAIYRTEQLE RVVFDTRAFL TPFLEWYYVV AMALFLVIVI WLGVGRYKNV RLGRDDEVPE FTTVSWLAML FAAGMGVGLL FWAVAEPLSH YGGNPFLLDN GETAEAADMS MVLTYFHWGL NAWAVFALLA LILAYFGFRR GQPLALRSAL HPLIGKYSHG WPGDIVDLLA ILATVFGIAT TLGLGIQQLD TGLVHTLGIS GGENGQLFLA ALLTVIAIVS VITGVQVGVQ RVSQANMWLS VALMGLLLIW GPTQYLLALF VQSSGSYLQN LLGLSLYTHA HQTDPWHSDW TVFYWGWWLA WAPFVGLFIA RISRGRTLRE FVLGVLLVPT VITFFWLSML GGTALYAEVN GVADIADKVS EDLTMATFAT MDTLEPWLVA KIGGGLITIL IATYLLTSAN AGIVVINTLL AHGSTVHRKR HLTIWGALIG LITAVLLLAG GLEVLQSAVI LAALPFSLVI LMMIVGLIRG LEQERWAPRP GERTVLPSEP WQVPADRMNE DYDSEDDAPE SGPDDDGKDE REPPPRPW
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