| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1858 |
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| Symbol | |
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| ID | 8807631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1973988 |
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| End bp | 1974620 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | OmpA domain protein transmembrane region-containing protein |
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| Protein accession | YP_003461085 |
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| Protein GI | 289209019 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00635914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.135318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTT ATCTGGCTGC CGGGGTTGCA GTATCGGCGC TCGTCCTGTT GGGTTCCCAG
AGTGCGCTGG CACAGCAGGA TCGCGATCGC ACGACCCAGG AGCGTGACCG CACCACGGGT
GTGTATATGG GTCTGGGGAC GGGCTTCAGC TCGCTGAAGA ACGACAGCGA CGAGGTCGCG
GATTTCATCG GATCCGGGAC GTCGGACTAC AGCATCGACG ACGATGACAA CGTCTGGCGC
GGCTTTGTCG GTTACAACTT CAATCGCTAT CTCGCGGTCG AGGGCTTCTA TACCGATCTG
GGCGAGGTGA CTTTGCGCGG GGACGAGGAT GGCGCGCACT CGAGCGTCCG CTCGACGGCC
TACGGTGCCA GTGTGCTCGG CAAGTTGCCG ATCGGCCCCT ATGTGGAGGC CTTCGCGAAG
GTCGGTGCGG CCAAGTGGGA TGCGGACGTA CGCGGTAACC TGGGAGACGA GGGCCGTACG
CTGCGCAGTC AGGACGGTTT CGATCCGGTC TATGGTGTCG GGATGCAGGT CAATCTGAAC
GCGTTCATGA TCCGCGCGGA ATACGAGCGC TATGACTTCG ACAGCGACTA CAAGATGGAC
GCCTTCACCG CGTCGCTGGG CTGGCGCTTC TAG
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| Protein sequence | MKRYLAAGVA VSALVLLGSQ SALAQQDRDR TTQERDRTTG VYMGLGTGFS SLKNDSDEVA
DFIGSGTSDY SIDDDDNVWR GFVGYNFNRY LAVEGFYTDL GEVTLRGDED GAHSSVRSTA
YGASVLGKLP IGPYVEAFAK VGAAKWDADV RGNLGDEGRT LRSQDGFDPV YGVGMQVNLN
AFMIRAEYER YDFDSDYKMD AFTASLGWRF
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