| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1365 |
|---|
| Symbol | |
|---|
| ID | 8807131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1458182 |
|---|
| End bp | 1459207 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | Protein of unknown function DUF2235 |
|---|
| Protein accession | YP_003460607 |
|---|
| Protein GI | 289208541 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.149808 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.119646 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGTC GTATCGTGAT CTGCGCGGAC GGGACCTGGA ACCGTCCGGA GGAGGACGTC
GAATCCGACG TCCCCACCAA CGTCTTGCGC CTGGCCCGCG CGGTAGCGCC CGTGGACGCC
GCCGGCGATA CCCAGCAGGT GTTCTATGAC TGGGGTGTGG GGTCGTACCA CGCCCGGATC
AGTGGCGGCG TGACCGGGCG GGGCATCCAC AAGAACATCA CCGATGCCTA CCGCTACATC
GTGCAGAACT ACGCCTCGGG GACCGAGCTT TTCCTGTTTG GATTCAGCCG GGGTGCGTAC
ACCGTGCGCA GCCTGTGCGG TCTGATCAAC AACTGCGGGA TTCTCCGGCG TCCGGATGCG
CGTCTGATCG AGGAGGCCTT TCGCCTGTAC AAACGCACGG GGGCGGCGTA CAAGCCCGAA
GGCAAGCACT CGCGCGCCTT TCGCGAGGCG CACAGCCACC CCTCGCGGGA GATCCGTTTC
GTGGGTGCCT GGGATACCGT CGGGGCACTG GGCATCCCGT TTTCGGTGCT CGGACTGTTC
GACCGCACGG ACGAGTTCTA CGACACCAAG TTGGGCCCGA ACGTCCGCAT CGCGCGCCAT
GCACTGGCCA TCGACGAGCG CCGGGCAGAT TTCGAACCCA CCCTGTGGGA GCCGCGCGAA
GGACTGGACC TGGACCAGCA GTGGTTCGCC GGGGTGCACG CGGATATCGG GGGCGGCTAT
CCACCCGATG CCCAGGGGCT GCGGGTCGCC GATATTGCCC TGGACTGGAT GCTGGAGCAG
GCATCCGCCG GAGGACTGGA GTTCGAGCCG CACCTTCCGG CCAGCCTGCG CCCCGACTCT
CGCGCCGCGA TCCACCAGTC GCGGCGTCAC ATCTATCGCT TGCGCCGCAC ACTGGTCCGG
GACCTCGACC AGGGGGATTC TCCGACGCGG CTGCACCCGT CGGTCGAAGC ACGCTACCGG
CAGTCCCGCG ACTACCGTCC TCCAAACCTC AAGGCCTATC TCGACAAGCG ATCCCGCGAC
AGGTGA
|
|---|
| Protein sequence | MTRRIVICAD GTWNRPEEDV ESDVPTNVLR LARAVAPVDA AGDTQQVFYD WGVGSYHARI
SGGVTGRGIH KNITDAYRYI VQNYASGTEL FLFGFSRGAY TVRSLCGLIN NCGILRRPDA
RLIEEAFRLY KRTGAAYKPE GKHSRAFREA HSHPSREIRF VGAWDTVGAL GIPFSVLGLF
DRTDEFYDTK LGPNVRIARH ALAIDERRAD FEPTLWEPRE GLDLDQQWFA GVHADIGGGY
PPDAQGLRVA DIALDWMLEQ ASAGGLEFEP HLPASLRPDS RAAIHQSRRH IYRLRRTLVR
DLDQGDSPTR LHPSVEARYR QSRDYRPPNL KAYLDKRSRD R
|
|---|
| |