| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_1045 |
|---|
| Symbol | |
|---|
| ID | 8752706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 1104550 |
|---|
| End bp | 1105518 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | Patatin |
|---|
| Protein accession | YP_003408176 |
|---|
| Protein GI | 284989622 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0588831 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTCG GCGTGGTGCT GGGCGGTGGC GGCGTCGTGG GCCAGGCGTA CCACTCGGGC
GTGCTGGCGG TGCTCGAGCA CGACTTCGGC TTCGACGCCC GCACGGTGGA CGTGATCGTC
GGGACCTCGG CCGGCTCCAT CACCGGCACG CTGCTGCGGC TCGGCGTCTC CGCCGAGGAC
CTCGCCGCCT GGACGGTGAA GGCACCGCTG TCCGACGAGG ACGAGGTCCT GCGGCACGTG
GCCGGCACTC CGGTCCCGGA GCTCGCCCCC TTCAACCCGC TGCACGTCCT GCGCCGGCCG
CTGCGGCTGC CGGGCCGGCA CATGGTGCAG CGCGCGCTGG CCCGCCCGTG GCAGTTCCGG
CCGCTGGCGG CCGGCATGGC CCTGATCGCG CCCGGGCAGC ACGACATCGC CGAGCAACTG
GCCGCACTCC GCGAGCTTGA GGGGCCGGGA TGGCCGGACC CGGACCTGTG GATCTGTGCC
GTCCGGCAGC GCGACGGCCG CCGGATCGTG TTCGGTCGCC CCGGCACGCC CGAGGTGCCG
GTGCACCAAG CGGTCGCGGC GTCGTGTGCG GTGCCCGGCT ACTTCGCTCC GGTCCGGATC
GGAGGGCACG GCTACGTCGA CGGCGGGGTC CACTCGCCGA CCAACGCCGC CGTCCTCCGC
GGTCGCGGAC TCGACCTCGT TCTCGTCATC TCGCCGATGA GCGGTCCGGC GGGGTGGCTC
CCCGACGTCT ACGCGGCCTC CCGCCGGCAC GCCGCACGCC TGCTGAGGCA GGAGGTCAGG
GCGCTGCAGC GGGCGGGTAT CCGGACGGTC GTCTTCGCTC CCGGCGCGGC CGAGCAGCGC
GCCATGGGCA ACGACATGAT GTCGCGGCAC GACCTCAACG GCGTCATCCA GACGTCCTTC
CTGGCGACCG GCGCGTATGC CGCCAGACCC GAGGTCGCCG ACCTCATCCG AGCCGCAGTC
GGCCGCTGA
|
|---|
| Protein sequence | MRVGVVLGGG GVVGQAYHSG VLAVLEHDFG FDARTVDVIV GTSAGSITGT LLRLGVSAED
LAAWTVKAPL SDEDEVLRHV AGTPVPELAP FNPLHVLRRP LRLPGRHMVQ RALARPWQFR
PLAAGMALIA PGQHDIAEQL AALRELEGPG WPDPDLWICA VRQRDGRRIV FGRPGTPEVP
VHQAVAASCA VPGYFAPVRI GGHGYVDGGV HSPTNAAVLR GRGLDLVLVI SPMSGPAGWL
PDVYAASRRH AARLLRQEVR ALQRAGIRTV VFAPGAAEQR AMGNDMMSRH DLNGVIQTSF
LATGAYAARP EVADLIRAAV GR
|
|---|
| |