Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_4403 |
Symbol | |
ID | 8745031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013744 |
Strand | - |
Start bp | 674661 |
End bp | 676139 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 646514940 |
Product | sugar transporter |
Protein accession | YP_003405887 |
Protein GI | 284167609 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.92249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCTGA TTCACCGACT ATTGCCGGTA GGAGACGACG ATATCGGTCC GTTTGTTATC GTTATCTCCG CGCTCGCCGC GCTGAACGGA CTACTGTTCG GGTTCGACAC CGGCGTTATC TCGGGGGCGT TGCTCTACAT GTCCGAGACG TTCCCCCAAC TCGAGGCGAA CGCGTTCTTG CAGGGAACCG TCGTCAGCGG TGCGATGGTC GGCGCGATCG TCGGCGCGGC CTTCGGCGGC CGGCTCGCGG ATCGGATCGG GCGGCGCCGG CTCATCCTGC TCGGCGCCGT CCTGTTCTTC GTCGGGTCAT TCATCATGGC GGTCGCCCCC ACGGTCGAGA TTCTGATCCT CGGCCGACTC CTCGACGGGA TCGGGATCGG CTTCGCGTCC GTCGTCGGAC CGCTGTACAT CTCGGAGATG GCACCGGCGA AGATCCGCGG ATCGCTCGTG ACGCTCAACA ACGTCGCTAT CACGGGGGGA ATCCTCGTGT CCTACATAAC GAACCAGCTC ATCGCAAACA TGGCATTCGA CGCCGGCCTC TCGTGGCGGA TCATGCTCGG GCTCGGGATG CTCCCCGCCG TGGTCCTGTT CGGCGGGATC ATCTTCATGC CGGAGAGTCC GCGGTGGCTC GTCGAAAAGG ACCGAGAGCA GGAGGCTCGA TCCATCCTGA GTCGCGTCAG GAACGGCACT AACATCGATG CCGAAATGAA GGATATCATG CAGATGTCCA AGCGCGAGCA GGGGAGCTTT CGCGACCTCC TGCAGCCGTG GCTTCGCCCG GTCCTGATCG TGGGCCTCGG CCTCGCGATG TTACAGCAGG TCTCGGGAAT CAACGCGGTC GTCTACTACG CGCCGACGAT ACTGGAGTCG TCCGGATACA GCGACATCGC GTCCCTCTTC GGGACGATCG GAATCGGCTC GATCAACGTG TTGCTGACGG TCGCCGCGCT GTTCCTGGTC GACCGCGTCG GCCGTCGACC GCTGTTGCTC TTCGGCCTCG TCGGGATGTG TATCTCGGTG ACCGTCCTCG CCGGGGCCTA CATGGTTCCC AGCATGGGCG GGATCATCGG TCCGATTACG GTCGTGAGCC TCATGCTGTT CGTCGGCTTC CACGCGGTCA GTCTCGGCTC GGTCGTCTGG CTGGTCATCT CCGAAATCTT CCCGCTGAAC GTCCGCGGGG CCGCGATGGG AGTGACGACG TTGGTCCTCT GGTTCTCGAA CTTCCTCGTC GCACAGTTCT TCCCGTCGCT GTTCGAGATC GGCCCCACGG TCGCGTTCGG CGTGTTCGCG GGGATCGCGG CGGCCGGGTT CGTCTTCGTG TACGCGCTGG TCCCGGAGAC GAAAGGCCGG ACCCTCGAGG AGATCGAGGC CGATCTGCGC GAAACGGGCG TCGCCGACGA TAATCTGGCG CTCAGCGAGC AGGCCGAACA GGTCGATCCG ACTGAGCAGG TCGATCAGAC CGATCACGTC AACGACTGA
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Protein sequence | MSLIHRLLPV GDDDIGPFVI VISALAALNG LLFGFDTGVI SGALLYMSET FPQLEANAFL QGTVVSGAMV GAIVGAAFGG RLADRIGRRR LILLGAVLFF VGSFIMAVAP TVEILILGRL LDGIGIGFAS VVGPLYISEM APAKIRGSLV TLNNVAITGG ILVSYITNQL IANMAFDAGL SWRIMLGLGM LPAVVLFGGI IFMPESPRWL VEKDREQEAR SILSRVRNGT NIDAEMKDIM QMSKREQGSF RDLLQPWLRP VLIVGLGLAM LQQVSGINAV VYYAPTILES SGYSDIASLF GTIGIGSINV LLTVAALFLV DRVGRRPLLL FGLVGMCISV TVLAGAYMVP SMGGIIGPIT VVSLMLFVGF HAVSLGSVVW LVISEIFPLN VRGAAMGVTT LVLWFSNFLV AQFFPSLFEI GPTVAFGVFA GIAAAGFVFV YALVPETKGR TLEEIEADLR ETGVADDNLA LSEQAEQVDP TEQVDQTDHV ND
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