| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_3303 |
|---|
| Symbol | |
|---|
| ID | 8733752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 3512718 |
|---|
| End bp | 3514214 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646503920 |
|---|
| Product | drug resistance transporter, EmrB/QacA subfamily |
|---|
| Protein accession | YP_003395096 |
|---|
| Protein GI | 284044756 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.213054 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCGC TTTCTCCTGC CGCCCCCGCG CAGGGCTCCG GCACCGAGAC GAACCGCTGG
GTCGTCCTCG TGCTCGTCTG CCTCGCGCAG TTCATGGTCG TCCTCGACGC GACGATCGTG
AACGTCGCGC TGCCGTCCAT CCAGACGGAC CTCGACATCA CCGCGGGCAA CCTCGCGTGG
ATCATCAACT CCTACACCCT GCTGTTCGGC GGCTTCCTGC TGCTCGGCGG TCGTGCCGCC
GACCTGTTCG GCCGCAAGCG CGTCTTCCTC GCCGGCGTGG TCCTCTTCAG CGTCGCCTCG
CTGCTGTGCG GCCTGGCGAC CTCGCAGGAG ACGCTGATCG CCTTCCGCGG CCTGCAGGGC
CTCGGCGCGG CGCTCGTCTC CCCCGCCGCA CTGTCGATCA TCATGACGAC GTTCGCCGAC
GGCGCCGAGC GCACGAAGGC GCTCGCGGTC TGGGGCGCGA TTGCGGCCGG CGGCAGCGCC
TTCGGCCTGT TGCTCGGCGG CGTCCTGACC GAGGCGCTGT CATGGCCGTG GATCTTCATC
GTCAACGTCC CCGTCGGCAT CGCGGCGTTC GTGCTGTCGC TCAGACTGAT CCCGGAGTCG
AAGGCACCGG ACGCAGGGCG CGGCTTTGAC GCGCTCGGCG CCGTCCTCGT CACCGGCGGT
CTGATCTCGC TGGTCTACGC GATCGTGAGA GCCGAGAGCG CCGGCTGGGG GTCGACGACC
ACGCTCGGCT TCGGCGCACT GGCGATCGTC CTGCTCGTTG GGTTCGTCGT CGCCGAGCGT
GTCCAGTCGC AGCCGCTCGT GCGGCTGGGC ATCTTCAGCA CCCGTTCGCT GTCGACGGCG
AACGGCGTGA TGCTCGTCGT CGCCGGCGGC ATGTTCGCGA TGTTCTTCTT CGCGACGATC
TACGTCCAGG TCGTCCTCGG TTACTCCCCG ATCGAGGCCG GGCTCGCGTT CCTGCCGTTC
ACCGTTGGCA TCATCGCCGG CTCGGTCGCG GCGCAGCAGC TGATCCCGCG GATAGGCGTG
CGGGCGCAGA TCCTCTTCGG CCTCACGCTC GCGGCGATCG GCCTGCTGCT GATGATGCGG
ATCACGGCCG ACGGCGACTA CGTCACGCAG CTGCTGCCGG CGGTGCTCGT GATGTCGATC
GGCATGGGCA ACACGTTCGT GCCGCTGACG CTGCTGGGGA CGACGAACGT GGAGGAGCGC
GACGCCGGGC TCGCCTCGGG GCTCTTCAAC ACCTCCCAGC AGATCGGCGG CGCGCTCGGC
CTCTCGATCC TCTCGACGCT CGCGGCCTCG CGCACGGAGA GCCTGAGAGA GGAGCTGGCG
CCCGGCGCCT CGCCGCTGGC GGTGCTCGAG ACGCTGGTCG ACGGCTACCA CGTCGCGTTC
CTGATCGGCG CGGTCTTCAT CGCCGCCGGC GCGCTCGCGA TCGTGCTGCT GATCCGCAGA
AGCGACGTCG CCGCGATCAA CGACGTCGAC CCCGCGAGCG TCCAGATGGC GCACTAG
|
|---|
| Protein sequence | MSSLSPAAPA QGSGTETNRW VVLVLVCLAQ FMVVLDATIV NVALPSIQTD LDITAGNLAW
IINSYTLLFG GFLLLGGRAA DLFGRKRVFL AGVVLFSVAS LLCGLATSQE TLIAFRGLQG
LGAALVSPAA LSIIMTTFAD GAERTKALAV WGAIAAGGSA FGLLLGGVLT EALSWPWIFI
VNVPVGIAAF VLSLRLIPES KAPDAGRGFD ALGAVLVTGG LISLVYAIVR AESAGWGSTT
TLGFGALAIV LLVGFVVAER VQSQPLVRLG IFSTRSLSTA NGVMLVVAGG MFAMFFFATI
YVQVVLGYSP IEAGLAFLPF TVGIIAGSVA AQQLIPRIGV RAQILFGLTL AAIGLLLMMR
ITADGDYVTQ LLPAVLVMSI GMGNTFVPLT LLGTTNVEER DAGLASGLFN TSQQIGGALG
LSILSTLAAS RTESLREELA PGASPLAVLE TLVDGYHVAF LIGAVFIAAG ALAIVLLIRR
SDVAAINDVD PASVQMAH
|
|---|
| |