| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5620 |
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| Symbol | |
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| ID | 8729394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6840779 |
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| End bp | 6842518 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003390384 |
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| Protein GI | 284040454 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCATT CAACTAAAAA TAGTTTGCCC CCCATTCCAT CCGGCAAGAA ATTCGACGCC
ATTGTTGTTG GCTCTGGCAT TAGTGGCGGC TGGTCGGCGA AGGAGCTTTG TGAGAAAGGA
ATGAACGTGC TGCTGCTCGA ACGGGGGCGG ATGATTGAGC ACGTGTCGGA TTACCACACG
GCCACGATGA ATCCGTGGGA TTTTTCGCAC CGTAATCAGG CCATGCCGCT GGATGAACTT
AAGAAATACC CGGTGCAGAA CCGAACCGGG TTTACCATTA CCGAAGCTAC CCACCAACAC
TTTGTCAATG ACCTGGACAA TCCGTATGTC GAAGAGAAAC CATTTGACTG GATTCGGGGG
TATCATGTCG GGGGTAAGTC GCTGATGTGG GGGCGCTACT CGTTCCGCTT CTCTGACCTC
GACTTTGAAG CCAACGCCAG GGAAGGCATT GCGACGGACT GGCCCATTCG CTACAAAGAC
ATAGCTCCCT GGTACGATTA TGTCGAGAAG TTTGCCGGTA TTGCCGGAGA TCGGGACGGC
CTGCCGCATC TGCCCGACGG TCAGTTTCAG CCCGCCCTGC CCGACAACTG CGTCGAAGCG
CACCTGCGTA AATCTGTGAA TGGAATGTTT CCCGACCGAA GGGTAATTTC GGCGCGGGCC
GCTCACCTGA CTGCCCCTAC CAAAGAGCAA ACAAGTCTGG GACGTGCCAA ATGCCAGTTC
AGGAATTTGT GCATGCGGGG CTGTCCGTAT GGGGCCTATT TCAGTACGCA GTCGGCCACG
CTGCCCGCTG CCCGCCAGAC AAAACGCCTT ACCGTTCGGC CGCATTCTAT CGTCAACTCC
CTTATTTATG ATGAAAAAAC GGGTTATGCG ACGGGCGTGC GGGTTATCGA CGAGCAAACG
CACGAATGGC ACGAATTTAA GGCCAGTATC ATTTTTCTGA ACGCATCGGC GCTGGGGTCT
ACCTTCATCC TGATGAACTC CCAATCGAAC CGCTTTCCAA ACGGAATGGA CGATAGCGGG
CAACTGGGCC GGAACCTGAT GGACCATCAT TTTCACGTAG GTGCCACGGC CGATTACGAA
CACGATCTGG ATAAATACTA CTACGGTCGG CATCCGGCGG GGCTGTATAT TCCGCGCTTC
CGGAACCTGC CGGGTCAGGC GAATCAGCCG TTTAAGCGTG GCTACGGGTT TGAAGTGTAC
ACCAACCGTG AGAACTGGGA CCACGCTTAC CACGACGAAG GTTTCGGGGC TGATTTTAAA
GAAAAAGCTA CCCATTTTGG TAACTGGAAA ATAACGCTCG ACGCCTTCGG TGAATGCATG
CCATACGAAG ACAATCGGGT GTATCTGACG ACCGACGTTA CCGACAAATG GGGGCAGCCC
GTCCTGAAAA TGGATGTTCA CTATCGTGAG AACGAAACGC TCATGCGCAA AGACGCCAAA
GAACAGGCCG TTCAGATGCT TGAAAGAGCA GGTTTCTCGA ACATTAACGG CTTCGACGCG
CAGGCTCATC CGGGCCTGAG TATCCACGAG ATGGGTACCG CCCGCATGGG AACATCACCT
GAAAATTCGG TCTTTAACAA GTTCAACCAG CACCATCTTG TCAAAAACGT ATTCTGCACC
GATGGAGCTT CCATGACCTC ATCGCCCTGT CAGAACCCCT CACTCACGTA TATGGCTTTA
TCCGCGCGGG CGGCTGATTA CGCCGTTAAA GCATTAAAGC GAGGAGAAAT AAAGTCGTGA
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| Protein sequence | MTHSTKNSLP PIPSGKKFDA IVVGSGISGG WSAKELCEKG MNVLLLERGR MIEHVSDYHT
ATMNPWDFSH RNQAMPLDEL KKYPVQNRTG FTITEATHQH FVNDLDNPYV EEKPFDWIRG
YHVGGKSLMW GRYSFRFSDL DFEANAREGI ATDWPIRYKD IAPWYDYVEK FAGIAGDRDG
LPHLPDGQFQ PALPDNCVEA HLRKSVNGMF PDRRVISARA AHLTAPTKEQ TSLGRAKCQF
RNLCMRGCPY GAYFSTQSAT LPAARQTKRL TVRPHSIVNS LIYDEKTGYA TGVRVIDEQT
HEWHEFKASI IFLNASALGS TFILMNSQSN RFPNGMDDSG QLGRNLMDHH FHVGATADYE
HDLDKYYYGR HPAGLYIPRF RNLPGQANQP FKRGYGFEVY TNRENWDHAY HDEGFGADFK
EKATHFGNWK ITLDAFGECM PYEDNRVYLT TDVTDKWGQP VLKMDVHYRE NETLMRKDAK
EQAVQMLERA GFSNINGFDA QAHPGLSIHE MGTARMGTSP ENSVFNKFNQ HHLVKNVFCT
DGASMTSSPC QNPSLTYMAL SARAADYAVK ALKRGEIKS
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