Gene Slin_5401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5401 
Symbol 
ID8729168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6567066 
End bp6570752 
Gene Length3687 bp 
Protein Length1228 aa 
Translation table11 
GC content57% 
IMG OID 
Productmolybdopterin oxidoreductase 
Protein accessionYP_003390167 
Protein GI284040237 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAAAA CGACCTGTTG CTATTGTGGT GTTGGCTGTG GGATTGTCGT CAAACAGGAG 
CCGACCGGAC GATTGATCGT TGAGGGAGAT AAACAGCATC CGTCCAACAA GGGAATGCTG
TGCTCGAAGG GCATGAATCT GCATTATACC GTCATGGACC AGTCGGACCG GCTGCTGTAT
CCGCAGATGC GTCTTAACCG GAATATGCCC ATGCAACGGG TAAGCTGGGA TGCCGCGCTG
GAGCGTACAG CCGCTGTATT CCGGACATTC ATTCAGAAAT ACGGCCCTGA TTCAGTCGCG
TTTTATGTGT CGGGGCAGTG CCTGACCGAA GAATATTACC TGGTCAATAA GCTCATCAAA
GGCTTTATTG GCTCGAACAA CATAGATACC AACTCCCGGC TCTGCATGAG TTCGGCAGTG
GTGGGCTACA AACTGTCGCT GGGCGAAGAT TCGGTGCCGG TCTGTTACGA CGATATTGAA
GAGGCCGACG TGTTTCTGGT GCAGGGAGCT AATCCCGCCT GGTGCCACCC TATCATCTGG
CGTCGGATTG AAGCGCACAA AGCGGCCAAT CCAAACGTCA AAATCATTTG CGTCGATCCT
CGTAAAACTG ATACGGCCCG GTCTTCTGAT CTTCATTTGC CCATCCGTCC CGGCACCGAC
ATCGTGCTGA ATAACGCCAT TGGCCGGTTG CTAATCGAGA ACGGCGACAT TGATGTTGAT
TTCATCACCA ACCACGCCGA CGGATTTGCC GCTTACAGCG AGCAGGTGAT GCAGCGAACC
CTCGCCGAAG CCGCCGATAT GTGTGGCGTT CCGGTGGCTG ATATTCAGAA AGTGGCCGAC
TGGATTGGTC GCTCAAAAGG CTTTTTATCG CTCTGGACGA TGGGCCTGAA CCAGTCGGTG
ATTGGCGTGA ACAAAAATCT GGCGCTCATC AACCTGCACC TGATTACGGG GCGGATTGGC
AAGCCCGGCA ACGGGCCGTT CTCGCTCACG GGCCAACCCA ACGCCATGGG TGGCCGCGAA
ACGGGTGGCC TTGCCAACGT GCTGCCCGCC CACCGCGACG TGACCAACGC CACCCACCGC
GCCGAAGTAG AAGCGTTCTG GAACAGCCCG GTCAAGATTG CGTCGAAACC CGGCCTGACC
GCCACGGAAA TGTTCGAGGC ATTGGCGGAC GACCGCTTAA AAGCCATCTG GATCATCAAC
ACAAATCCAA TGGTGAGTAT GCCCGATGCC AATGCCGTTG AGAAAGCGTT GACCAACGCC
CGTTTTGTGG TCGTTCAAGA CGTCTCGAAC CGGGCCGACA CCGTGCAGTT TGCCGACGTA
GTACTGCCCG CTGCGGCCTG GCTCGAAAAA GAGGGCACCA TGACCAACGC CGAACGGCGA
ATTGCATACT TACCCAAAGT CATTGATGCC CCCGGCGAAG CCCTGCCCGA CTCCGAAATC
ATCTGGCGAT TCGCCCAAAA GATGGGCTTC GGCGACGCTT TCCCATACAC CAACACCTCC
GCCGTTTACG ACGAATACGC CCAGCTCACC GCAGGCACCA ACGTGGACAT CACGGGCGTA
AACTACGATC TCCTCAAGCA AAAACGCACC GTACAGTGGC CTTATCCGGC AGGGGGTAGA
GGGCAATGGG TAAAGACTAT GGTGAACAAG GCACAGGGTG AAAAGGGGAT TTCTCCCCTC
CCCTTAGTTC AAGGTGGTCC GGCATTCCGG GAGGGGCCGG GGCGGTCGGC CGTTGCCGTG
GGGCCAACCT CCTTCGGCAC CAAACGCCTA TTCACCGACC ACAACTTTTA CACACCGAAT
GGCCGCGCAC AAATCCACGC CGTGCCCGAC GAAAATACAT CTGAGCCTAC CGATGCTGAC
TTTCCGCTGA TCTTAACCAC TGGTCGTATC CGCGACCAGT GGCACACCAT GACCAAAACG
GGTCGGGTTG CCAAGCTGAA TCAACACAGC CCGCAGCCCT TTCTGCAAAT CCATCCCGAC
GATGCCAGAG CAAGAAACAT TGCCGAAGGG CAGCTTGTCG TCGTTCGCGG TCGGCGGGGC
GAGGTGCGCG TAAAGGCTCA ACTCACCGAC GATGTGCGAC CGGGTTTGTG TTTTCTGCCG
ATGCACTGGG GGAAGGTGCT GGCCGGGAAG TCGGGCGAAA GCAACCTGAA CCGGGCTAAT
AACCTTACCA ACGCGCTCGT TGATCCGCGT TCCAAAGAGC CGGACTTCAA GTTTACGGCC
GTGGAGGTTG TACCGTTCAG TAAGCCGGTC GAAAAGATCA TCATTATCGG GGCCGGTTCG
GCGGGATTGG GTTTCATCAA CGCCTATCGT GCGCTGAGGT CTGGGCGGGT CGAAACGCCC
GTCAACGACG AACTGCATAT TTTCTCGAAA GAAATTTACC CGTTTTATAA CCGCGTGCTG
CTGCCCGATT ACATAAGCGG GGCGCAGTCT TGGGAGCAGC TTGTCAAACT GCGTGAAGAC
CAGTTCGAAG AAGCCCGTAT CATTGTCCAT AAAGGGGTCG GCATTGCACA CATCGACCGG
AACGCCAAAG TTGTTGTCGA TACCAACGGC GTCGAGCACA GCTACGACAA ACTCTTGCTC
GGCACGGGCA GCAATGCCTT CATGCCCAAA GGAATTCCTC GTTTGCCGGG GATTTTCAAC
ATGCGGTCGC GGCTCGACGC CGACTCGCTG ATGCCGTTCC TGAATCGGCC AGCCGATGGC
TCGGAGCCGC ATACGATCAT TGTCGGCGGT GGCTTGCTCG GGCTAGAACT GGCGGCATCG
TTGCGGCAGA TCAACGTTCG GGTGACGGTC ATTCAGCGGG TGGGCCGGTT CATGGAACGC
CAACTCGACC CACTCGCCAG CGAACTGCTC TACCTCGAAC TTCTCGACCG GGGTATCGAT
GTGTACTTCA ATGAAGAAGT TCAGACGTTC ATGGGCACCG AAAAAGTAGA AGGTATTCAG
CTCAAATCGG GCAAGAAACT GAATTGTCAG GTGGTGGTGA TGGCCATTGG AACGGTGCCA
AACATCGAAC TCGCCCGGGA GGCCGGTCTG ACCTGCAACC GGGGCGTAGT CGTGAACGAT
TACCTGCAAA CCTCCGACCC CGACATTTTT GCCGCTGGCG AAGTGGCGCA GTGGAATGGC
CAGATGTGGG GCATTACGCT GGCTGCCGAG CAACAGGCCG AGACAGCCGC CCGCTTCATC
GCGGGCGATG TGTCGCAGCC GTATAAAGGC AGTTTGTCGA TCAGCATTCT GAAGATGGAA
GGGCTTCACC TGTGCAGCAT GGGTCTGACG GAGGTGCCAC CCAACGCGGG GCCGGAGTTC
GAAGAGATTG TGTTTATTGA CAAGTCGAAG CGGTATTACA AAAAGTGCAT CGTTCAGGGC
GATAAGCTCG TCGGAGCGAT TCTGGTGGGC GACAAAAACG AGTTTGCCGA GTTCCGCGAA
CTCATTGCCA ACGGCACCGA GCTTTCCGAA AAGCGGCTTC AGCTCCTGCG GGCCAGCAAG
CAGGTCGACC CCGTGGAAGG CAAGCTGGTG TGTTCCTGCA ACACCGTGGG GCAGGGCAAT
CTGGAGCGGG CCATCCAGGC CGGTTGCAGG GATTTCCAGC AACTATGCCA GAAAACCGGT
GCCGGAACGG GCTGCGGCTC GTGCCGGCCG GAAGTGCGGA GTATTCTGGA GAGGATGAAG
GAAGGCACAC TGGTTAATGT ACAATGA
 
Protein sequence
MHKTTCCYCG VGCGIVVKQE PTGRLIVEGD KQHPSNKGML CSKGMNLHYT VMDQSDRLLY 
PQMRLNRNMP MQRVSWDAAL ERTAAVFRTF IQKYGPDSVA FYVSGQCLTE EYYLVNKLIK
GFIGSNNIDT NSRLCMSSAV VGYKLSLGED SVPVCYDDIE EADVFLVQGA NPAWCHPIIW
RRIEAHKAAN PNVKIICVDP RKTDTARSSD LHLPIRPGTD IVLNNAIGRL LIENGDIDVD
FITNHADGFA AYSEQVMQRT LAEAADMCGV PVADIQKVAD WIGRSKGFLS LWTMGLNQSV
IGVNKNLALI NLHLITGRIG KPGNGPFSLT GQPNAMGGRE TGGLANVLPA HRDVTNATHR
AEVEAFWNSP VKIASKPGLT ATEMFEALAD DRLKAIWIIN TNPMVSMPDA NAVEKALTNA
RFVVVQDVSN RADTVQFADV VLPAAAWLEK EGTMTNAERR IAYLPKVIDA PGEALPDSEI
IWRFAQKMGF GDAFPYTNTS AVYDEYAQLT AGTNVDITGV NYDLLKQKRT VQWPYPAGGR
GQWVKTMVNK AQGEKGISPL PLVQGGPAFR EGPGRSAVAV GPTSFGTKRL FTDHNFYTPN
GRAQIHAVPD ENTSEPTDAD FPLILTTGRI RDQWHTMTKT GRVAKLNQHS PQPFLQIHPD
DARARNIAEG QLVVVRGRRG EVRVKAQLTD DVRPGLCFLP MHWGKVLAGK SGESNLNRAN
NLTNALVDPR SKEPDFKFTA VEVVPFSKPV EKIIIIGAGS AGLGFINAYR ALRSGRVETP
VNDELHIFSK EIYPFYNRVL LPDYISGAQS WEQLVKLRED QFEEARIIVH KGVGIAHIDR
NAKVVVDTNG VEHSYDKLLL GTGSNAFMPK GIPRLPGIFN MRSRLDADSL MPFLNRPADG
SEPHTIIVGG GLLGLELAAS LRQINVRVTV IQRVGRFMER QLDPLASELL YLELLDRGID
VYFNEEVQTF MGTEKVEGIQ LKSGKKLNCQ VVVMAIGTVP NIELAREAGL TCNRGVVVND
YLQTSDPDIF AAGEVAQWNG QMWGITLAAE QQAETAARFI AGDVSQPYKG SLSISILKME
GLHLCSMGLT EVPPNAGPEF EEIVFIDKSK RYYKKCIVQG DKLVGAILVG DKNEFAEFRE
LIANGTELSE KRLQLLRASK QVDPVEGKLV CSCNTVGQGN LERAIQAGCR DFQQLCQKTG
AGTGCGSCRP EVRSILERMK EGTLVNVQ