Gene Slin_4655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4655 
Symbol 
ID8728419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5668285 
End bp5669430 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content53% 
IMG OID 
ProductLinoleoyl-CoA desaturase 
Protein accessionYP_003389432 
Protein GI284039502 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCTC AATTAAAATT CAAAGACAGA ACCCGCTCAC AATTCTTTTC AACAGTCCGC 
AAACGAGTCG ACGCTTATTT TGTCGAGAAC GGTGTTTCGT CCAATGCCAA TGCGGCTATG
TGGCGTAAAG CCAGCTTTTT CCTAATTGGT TACGCAACTC TCTACGGCCT TATCCTGTCG
AACCAGTTTG GGTTATGGAC CATGTTCGGC ATGGCCATTG TGCTGGGTAT GTTTGCCGCG
TTCATTGGCT TTAATGTCTC GCACGATGGC CTGCACGGGT CGTTTTCGTC GCGCGGCTGG
GTAAACCGGC TTATGGGCAA CAGTTTTTAC CTGCTGGGAG CTAACCCCTA TATCTGGAAA
ATTACACACA ACATCGTTCA CCATACGTAC ACCAACATAC CGGGTCATGA CGAAGACATC
GAACTGGCGC CGGGACTGGT ACGGCTGGAC CCCCAGGAGG ACCTTAAGCC CTGGCACCGG
TTTCAGCAGT GGTACACCTT TCCGCTGTAT GCCCTGGCTT CGCTGTCGTG GGTATTTCGC
AAAGACTTCG TAAAATTTTT CAAGAATCAG ATCGGTCACC ACGATAACTC GTCGCATCCC
CGGCAGGAGT ATGTGAAGCT GTTCGCGTCC AAGATCATTT ATTATTTCTT CTTTCTGATT
TTACCCGTTC TTGTTCTTGA CCTGACCTGG TGGCAGCTGG CAGTGGGCTT TATCATGATG
CACATTGCTG AAGGTCTGGT ACTGGGGCTT GTTTTTCAAC TGGCGCACGC AGTGGAAGGT
ACCGACTTCC CCATGCCCGA CGAGCGGGGC GACATACAGG AGGCCTGGGC CGTTCACCAG
ATGCGTACGA CGGCGAATTT TGCGCCCGAT TCGGCAACAG CCGCGTTCTT CTGCGGTGGC
CTGAACCGGC AGATCGAGCA CCATTTATTC CCGAAAGTCT GTCACATTCA CTATCCGGCT
ATTTCTAAAA TTGTGAAGGA TACCGCCCAC GAGTTTGGCT TACCCTACCT CGAAAACCGC
ACCTTCGGCT CGGCGCTTTT GTCGCACTTC AGGCTGCTAC GGACATTAGG CCGCACCCAA
CCCGTCAGGC CGTTGGTCGC TCAGCCTGTG GCGGTAACAC AACAGGAACC AGTGCCCTTC
CTGTAA
 
Protein sequence
MSAQLKFKDR TRSQFFSTVR KRVDAYFVEN GVSSNANAAM WRKASFFLIG YATLYGLILS 
NQFGLWTMFG MAIVLGMFAA FIGFNVSHDG LHGSFSSRGW VNRLMGNSFY LLGANPYIWK
ITHNIVHHTY TNIPGHDEDI ELAPGLVRLD PQEDLKPWHR FQQWYTFPLY ALASLSWVFR
KDFVKFFKNQ IGHHDNSSHP RQEYVKLFAS KIIYYFFFLI LPVLVLDLTW WQLAVGFIMM
HIAEGLVLGL VFQLAHAVEG TDFPMPDERG DIQEAWAVHQ MRTTANFAPD SATAAFFCGG
LNRQIEHHLF PKVCHIHYPA ISKIVKDTAH EFGLPYLENR TFGSALLSHF RLLRTLGRTQ
PVRPLVAQPV AVTQQEPVPF L