Gene Slin_4205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4205 
Symbol 
ID8727964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5063473 
End bp5064756 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content52% 
IMG OID 
ProductOmpA/MotB domain protein 
Protein accessionYP_003388989 
Protein GI284039059 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA AACTTTTCAC GATCAGTTGT CTGCTGCTTG CCGCTACGGT GCAGGCACAG 
GTTCAGTTTA CGACTGAAAG TCCGCGTGTT GATGATATCA ACGACACCGA CGTTACGATT
CAGCGGGTTG AATTGACGGC TCAATACACC ATCATTTACA TGAAATTCCA GGCCCGGAAA
ACGGGCTTCA ATGGCCGGTC ATTCCCGTTT GATATGCCCA TACCGAATAG CCGGGGGTGG
GAGCAATTGG AGTCGACAAG CAATATTGGC TTCCAGCCAA CATCCCGTTT GTACGTAAAC
CAGGGTGAAC GCTCCTATAA ATTCATTCGT GCCGAAAACA TACCCGCAGA AACGCGTCGT
CAGGTTCGGC CAGGGGAGCG GGTCGACTTC ATTGCTTATT TCGAACGGAT TGATCCGGGG
TACACAAAAT TTGATCTCTT CGAATGCCGG GATAGTAAAA ACTATGTCTG TTTCAATTTC
TGGGGTGTTC ACATCATTAA TCCGCGTAAG GATAGCTATT CTCAACGGAA GCCGCCCGTT
CAGCCCCGGC AGCAGCCCCC CCGAACGGTT CCCCGCCCAC AGCCGGAGCC GCCGACCGAA
CAGCTTCCGC CTGACAACAC ACCCGTTCCT GTTCAGCCAA AGGTGTTGCC TGCGCCAGCA
ACGGTAGCCA TCAACGGCAT TACGCGCGAT GCGAAAACCA AGCAGCCTAT TACGGCGACG
GTTACGTACC GGCTGATATC AGGAGCCGAA GCATCGGGCG ATGAGCCCGC CGATTCGTTG
CAAAGTGGTA GCCTAACCGG AAAATACCGG ATAGAGATCG ACCGCCGGGG TGTTTATGCG
GTTACGGCAT CGGCAAAAGG TTATTTTAGT CAAAGTGATA CGCTGGTGAC CAACCGGGTC
GATGTGGCCC GCGATTTTAA CCTGGTGCCC ATTGAGGCCG GGGCAAAAAT TACCCTGAAG
AATATTTATT TCAATGTTTC CAAGTATGAC CTCAAGCCTG AGTCTTACCC GGAGCTGGAT
CGTCTGGTAA CCGTGATGCG GTCGAATCCG ACAATGCAGA TTCGACTCGA AGGACATACC
GATACCGTTG GCGAGTTTGA TGCCAATGTG GAGCTATCCC GCAATCGGGT CAACGAAGTA
AAACGCTATT TGGTCGATAA AGGAATTAGT GCCAGCCGCA TTGAAACCGT TGGTTATGGA
CCTTCGAGGC CCATCAACAC CAACAAAAGC CTGAAAGAAC GGCCTGAAAA CCGGCGGGTG
GAAATGGTGA TCGTGAAAGT ATAA
 
Protein sequence
MKFKLFTISC LLLAATVQAQ VQFTTESPRV DDINDTDVTI QRVELTAQYT IIYMKFQARK 
TGFNGRSFPF DMPIPNSRGW EQLESTSNIG FQPTSRLYVN QGERSYKFIR AENIPAETRR
QVRPGERVDF IAYFERIDPG YTKFDLFECR DSKNYVCFNF WGVHIINPRK DSYSQRKPPV
QPRQQPPRTV PRPQPEPPTE QLPPDNTPVP VQPKVLPAPA TVAINGITRD AKTKQPITAT
VTYRLISGAE ASGDEPADSL QSGSLTGKYR IEIDRRGVYA VTASAKGYFS QSDTLVTNRV
DVARDFNLVP IEAGAKITLK NIYFNVSKYD LKPESYPELD RLVTVMRSNP TMQIRLEGHT
DTVGEFDANV ELSRNRVNEV KRYLVDKGIS ASRIETVGYG PSRPINTNKS LKERPENRRV
EMVIVKV