Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4205 |
Symbol | |
ID | 8727964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5063473 |
End bp | 5064756 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | OmpA/MotB domain protein |
Protein accession | YP_003388989 |
Protein GI | 284039059 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA AACTTTTCAC GATCAGTTGT CTGCTGCTTG CCGCTACGGT GCAGGCACAG GTTCAGTTTA CGACTGAAAG TCCGCGTGTT GATGATATCA ACGACACCGA CGTTACGATT CAGCGGGTTG AATTGACGGC TCAATACACC ATCATTTACA TGAAATTCCA GGCCCGGAAA ACGGGCTTCA ATGGCCGGTC ATTCCCGTTT GATATGCCCA TACCGAATAG CCGGGGGTGG GAGCAATTGG AGTCGACAAG CAATATTGGC TTCCAGCCAA CATCCCGTTT GTACGTAAAC CAGGGTGAAC GCTCCTATAA ATTCATTCGT GCCGAAAACA TACCCGCAGA AACGCGTCGT CAGGTTCGGC CAGGGGAGCG GGTCGACTTC ATTGCTTATT TCGAACGGAT TGATCCGGGG TACACAAAAT TTGATCTCTT CGAATGCCGG GATAGTAAAA ACTATGTCTG TTTCAATTTC TGGGGTGTTC ACATCATTAA TCCGCGTAAG GATAGCTATT CTCAACGGAA GCCGCCCGTT CAGCCCCGGC AGCAGCCCCC CCGAACGGTT CCCCGCCCAC AGCCGGAGCC GCCGACCGAA CAGCTTCCGC CTGACAACAC ACCCGTTCCT GTTCAGCCAA AGGTGTTGCC TGCGCCAGCA ACGGTAGCCA TCAACGGCAT TACGCGCGAT GCGAAAACCA AGCAGCCTAT TACGGCGACG GTTACGTACC GGCTGATATC AGGAGCCGAA GCATCGGGCG ATGAGCCCGC CGATTCGTTG CAAAGTGGTA GCCTAACCGG AAAATACCGG ATAGAGATCG ACCGCCGGGG TGTTTATGCG GTTACGGCAT CGGCAAAAGG TTATTTTAGT CAAAGTGATA CGCTGGTGAC CAACCGGGTC GATGTGGCCC GCGATTTTAA CCTGGTGCCC ATTGAGGCCG GGGCAAAAAT TACCCTGAAG AATATTTATT TCAATGTTTC CAAGTATGAC CTCAAGCCTG AGTCTTACCC GGAGCTGGAT CGTCTGGTAA CCGTGATGCG GTCGAATCCG ACAATGCAGA TTCGACTCGA AGGACATACC GATACCGTTG GCGAGTTTGA TGCCAATGTG GAGCTATCCC GCAATCGGGT CAACGAAGTA AAACGCTATT TGGTCGATAA AGGAATTAGT GCCAGCCGCA TTGAAACCGT TGGTTATGGA CCTTCGAGGC CCATCAACAC CAACAAAAGC CTGAAAGAAC GGCCTGAAAA CCGGCGGGTG GAAATGGTGA TCGTGAAAGT ATAA
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Protein sequence | MKFKLFTISC LLLAATVQAQ VQFTTESPRV DDINDTDVTI QRVELTAQYT IIYMKFQARK TGFNGRSFPF DMPIPNSRGW EQLESTSNIG FQPTSRLYVN QGERSYKFIR AENIPAETRR QVRPGERVDF IAYFERIDPG YTKFDLFECR DSKNYVCFNF WGVHIINPRK DSYSQRKPPV QPRQQPPRTV PRPQPEPPTE QLPPDNTPVP VQPKVLPAPA TVAINGITRD AKTKQPITAT VTYRLISGAE ASGDEPADSL QSGSLTGKYR IEIDRRGVYA VTASAKGYFS QSDTLVTNRV DVARDFNLVP IEAGAKITLK NIYFNVSKYD LKPESYPELD RLVTVMRSNP TMQIRLEGHT DTVGEFDANV ELSRNRVNEV KRYLVDKGIS ASRIETVGYG PSRPINTNKS LKERPENRRV EMVIVKV
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