Gene Slin_4137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4137 
Symbol 
ID8727896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4985309 
End bp4986538 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content53% 
IMG OID 
Productdrug resistance transporter, Bcr/CflA subfamily 
Protein accessionYP_003388923 
Protein GI284038993 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0321092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.661568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAA AGACCTATTT CTTTCTAATC CTGATTTTAG GAAGCCTGAC GGCGCTGGGG 
CCGTTCTCCA TCGATATGTA CCTGCCTGGC TTTCCCGCTA TTGCCAAAGA CCTGCATACC
ACGGCGGCCA AAGTTTCTCT ATCCTTATCG GGCTATTTTA TCGGTATTTC ACTGGGTCAA
CTGCTATATG GTCCCTTGCT GGACCGATTT GGCCGTAAAC CTCCTTTGTA CGCCGGGCTG
ATTGTGTACA TCCTGGCTGC GGCCGGTTGC GCGTTGGCGA CCAGTATTGA CGGGTTAATC
CTGATGCGGG TTATACAAGC CATCGGCAGC TGTGCAGCGG CAGTGGCCTC GGTGGCTATG
GTGCGGGATT TGTTTCCGGT GAAGGATAAC GCCAAGGTGT TCTCACTCTT ATTGCTGGTG
GTAGGCGCTT CGCCCATGAT CGCCCCTACT GTTGGCGGGT ATGTGACCGC TGCCTGGGGA
TGGCAAGCCG TGTTTGTCAT CCTGATGGGA ATGGGAGTCG CTATTTTACT GGCTGTTTTC
TTATGGCTGC CGGCCAGTTA TGCGCCCGAT CGATCGATCT CGCTGAAGCC CCGCCCCATT
TTGCGTAACT TCTGGCAGGT GTTAAAGGAC CCCCAGTTCT ACACGTATGC CTTCACGGGC
GCAATCGCTT TCTCGGGGCT CTTTGCCTAT GTTTCAGGCT CACCGATTCT GTTTATGGAA
GTGTTTCATA CCAGTGGAAA AGAATATGGC TGGATCTTCG CCTTTCTTTC CGTTGGCTTC
ATTGGCTCCA GTCAGATTAA CACCCTACTG TTGCGAAAAT ACAAGAGTGA GCAAGTTGTC
TTTGCTGCCC TGGCTGGTCA GGTACTGGTT GCTCTGGTAT TTCTCACCGT GGCGTTGAGT
GGTTTGCTCA CACTTCCGAT CACGCTCGTC TTTCTATTTC TCTTCCTGTG TTGCATCGGT
TTTACCAACC CCAATGCGGC TGCCTTATCG CTGGCTCCCT TTACCAGAAA TGGCGGCAGT
GCTTCAGCGT TGATGGGTGC CGTGCAAATG GGCATGGGTA CGTTGATCTC GGTGATTATG
AGTCTGTTCG AAGTGCCCTC AGCCATACCT ATGGTGATGG CAATGGCGGG CTCGTCCACC
CTTGCCCTGC TGGTGTTATT GACAGGGAGA AGGCGGATAA CGGCTCCGGT TGAGGTTCAG
TCCGAATCAG AGGCCGCCCT ACTGCATTAG
 
Protein sequence
MSKKTYFFLI LILGSLTALG PFSIDMYLPG FPAIAKDLHT TAAKVSLSLS GYFIGISLGQ 
LLYGPLLDRF GRKPPLYAGL IVYILAAAGC ALATSIDGLI LMRVIQAIGS CAAAVASVAM
VRDLFPVKDN AKVFSLLLLV VGASPMIAPT VGGYVTAAWG WQAVFVILMG MGVAILLAVF
LWLPASYAPD RSISLKPRPI LRNFWQVLKD PQFYTYAFTG AIAFSGLFAY VSGSPILFME
VFHTSGKEYG WIFAFLSVGF IGSSQINTLL LRKYKSEQVV FAALAGQVLV ALVFLTVALS
GLLTLPITLV FLFLFLCCIG FTNPNAAALS LAPFTRNGGS ASALMGAVQM GMGTLISVIM
SLFEVPSAIP MVMAMAGSST LALLVLLTGR RRITAPVEVQ SESEAALLH