Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3423 |
Symbol | |
ID | 8727176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4150299 |
End bp | 4151507 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003388230 |
Protein GI | 284038300 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACAA CAGCCTCTCT GAATAAACCA AATCGAAACC TGTTCATTCA AAACCTGCTG ACGTTCTTTC TGAACCGGCA GGCGCTGGCC GTTGGGCTGG TCTTTGCTTC CGATAGTATT CTGTTCGGCA GTTGGGTTGC CCACATTCCG TTTGTCAAAG CCAAACTCCA TCTTTCTGAT GCTGAACTGG GACTAACGCT GTTTGCCATG CCCATTGGTT TACTGGTCAT GAATCCGCTA ACCGGCTGGA TTATTGCCCG GCTTGGTGAA GCCCGCGCCT GTTTCTGGTC GGCGGTAGGT TTGACATTAG CCGTTTGCAT CCCGCTCAAC GCGCCAAACC CGATAGTTCT TTGCCTTGGT TTATTCCTGA TGGGATTGAA TGCAGCCCTC ATCAACGTGG CCATGAACAC CACCGCTACA AATCTGGAAC GGGCACAGGG TATTGTTATC ATGTCGTCGT GCCATGGCAT GTGGAGTCTG GGCGGATTGT TTGGCTCAGG TATTGCAGGG GCTGTTATCG CGTTGCATGT ATCGCCCCCC ATTCATATCA TGATCATGGC AGGCTTAATT CTGCTCATGA CTTTTATTCT TCAACCGATT CTGGCAAAAA TCCCGTCGAG TAGCCGAACA GAAACGGGCG AGAAAGCCGG GTCGTCATTC GTTCGACCTA ATCTGGACTT GTTGTTAATG ATTTTGATCG GCTTGTCGCT GGCCATGGGC GAAGGGGCCG CTTTCGACTG GAGCGCTGTG TATTTGCGTG AGACACTTGG CGCCAGCAGT CAGATTGCCG CGCTGGGCTT TGGCGCGTTC TCGCTCACTA TGACCGGTTT CCGTTTCCTG GGCGATGCGA TCATCCCTAA AATAGGTGCC AAACGCTGGC TACAGATTGG GGGAGTTATT GGGGCAGCGG GTCTCTTATT CGCCATCGCT CTCCCCTACC CGGCAACGGC GTTGATTGGC TTTGGCGTGC TGGGAGCAGG TTGCTCGTTG GGTGCACCGG TGCTGTATGC GGCCTCTATG CGCGTAGAGG GCATTCCGCC CGCAGCTGGC CTGGCTACGT TTGCGACATT TAGTTTTATT GGCTTTCTGG CAGGTCCGCC CATCATCGGG TTTGTAGCCG AAGCCTTTGG ACTGGTGTAT GGATTAGGCT TCGTAGCCAT CATGCTACTG ATTTCGGCCG GTTTGGCCAA ACTAGTAAAG CTATTTTGA
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Protein sequence | MNTTASLNKP NRNLFIQNLL TFFLNRQALA VGLVFASDSI LFGSWVAHIP FVKAKLHLSD AELGLTLFAM PIGLLVMNPL TGWIIARLGE ARACFWSAVG LTLAVCIPLN APNPIVLCLG LFLMGLNAAL INVAMNTTAT NLERAQGIVI MSSCHGMWSL GGLFGSGIAG AVIALHVSPP IHIMIMAGLI LLMTFILQPI LAKIPSSSRT ETGEKAGSSF VRPNLDLLLM ILIGLSLAMG EGAAFDWSAV YLRETLGASS QIAALGFGAF SLTMTGFRFL GDAIIPKIGA KRWLQIGGVI GAAGLLFAIA LPYPATALIG FGVLGAGCSL GAPVLYAASM RVEGIPPAAG LATFATFSFI GFLAGPPIIG FVAEAFGLVY GLGFVAIMLL ISAGLAKLVK LF
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