| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2939 |
|---|
| Symbol | |
|---|
| ID | 8726690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 3551364 |
|---|
| End bp | 3552341 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | ATPase associated with various cellular activities AAA_3 |
|---|
| Protein accession | YP_003387750 |
|---|
| Protein GI | 284037820 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.346358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCAA CATCTTCCTT TACGTACCAT ACTAAAATCC GTGAGGTATT TAGTGAAATG
AGCCAGGTTG TGGTTGGTCA GGACCGGCTG CTCAACCGGT TGCTCATTGG TCTGTTTACG
GGTGGGCATA TTTTGTTGGA AGGGGTTCCG GGTCTGGCTA AAACACTCAC CATCAACACC
CTTGCGAAAG TACTTGAACT GGATTTCCAA CGGATTCAGT TTACGCCCGA TCTGCTCCCC
GCCGACCTGA TTGGCACCAT GATTTTCAAC CAGAAAACCG CTGAGTTCGA GGTTAAACAG
GGGCCTATTT TTGCCAATCT GATCCTGGCC GATGAGGTCA ACCGATCGCC GGCCAAAGTA
CAGGCGGCCC TGCTCGAAGC CATGCAGGAG AAGCAGGTGA CAATTGGGGA AGAAACGTTT
GTTCTCGACC GGCCCTTTCT GGTGTTGGCC ACCCAAAACC CGGTGGAGCA GGAAGGCACG
TATCCGCTTC CGGAAGCCCA GGTTGACCGA TTCATGATGA AGGTCTTTGT AGACTATCTG
AGCCGGGAAG ATGAAATGGA GGTCATGCGT CGAATGTCTA ACATGAATTT CGCCTATGAG
GTAAAACCCG TGCTGGGAAA GGAAGACCTG GTAGCCATCC GCAATGAAAT AAATACCATC
ACCATCTCGG AAACCCTTGA GCGATATATT ATTGAGTTGG TCTTTGCCAC CCGCCGACCA
CTGGAATATA GTCTCCGGGA TGAAGCCCGC TACATTCAGT TTGGGGTATC GCCCCGCGCC
AGTATCAACC TGAATCTGGC AGCCAAAGCC CTTGCCTACT TCGACCGGCG CGATTACGTC
CTGCCCGAAG ACATCAAAGA AGTAGCCCCT GATGTGTTCA ACCACCGCAT TATGCTCAAC
TACGAAGCGG AGGCCGACGG CGTTACAACG TTACAGGTCA TTGATTCCAT CCTGCGCAAA
GTAGCCATTG GACGGTAG
|
|---|
| Protein sequence | MQPTSSFTYH TKIREVFSEM SQVVVGQDRL LNRLLIGLFT GGHILLEGVP GLAKTLTINT
LAKVLELDFQ RIQFTPDLLP ADLIGTMIFN QKTAEFEVKQ GPIFANLILA DEVNRSPAKV
QAALLEAMQE KQVTIGEETF VLDRPFLVLA TQNPVEQEGT YPLPEAQVDR FMMKVFVDYL
SREDEMEVMR RMSNMNFAYE VKPVLGKEDL VAIRNEINTI TISETLERYI IELVFATRRP
LEYSLRDEAR YIQFGVSPRA SINLNLAAKA LAYFDRRDYV LPEDIKEVAP DVFNHRIMLN
YEAEADGVTT LQVIDSILRK VAIGR
|
|---|
| |