Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2535 |
Symbol | |
ID | 8726280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3056711 |
End bp | 3059293 |
Gene Length | 2583 bp |
Protein Length | 860 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | peptidase M14 carboxypeptidase A |
Protein accession | YP_003387352 |
Protein GI | 284037422 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.135366 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACT TTTTGCTGCT GGCGGGCCTA ACGGTCGCGT CACTGTCGGC TTCAGCACAG TCAACATCCT CTTCGTCAAC ATCTTTATCC CCATCTGCTG CGATTGATTC GCCCGCAAAA TTTCTGGGTT ATCAGATTGG TGAACGCTTC ACACCACATC ATCGGGTTCT GGCCTATGCC GAGCAGGTAG CCCGTCAACT GCCCAACCGG ATAAAATTAA TTCCTTACGG CACTTCCTAC GAGGGTCGTC AGCTGATGGT GGTGGCTATC GGCTCGGAAG CAAACATGAG CCGCCTGGAA GAAATCAGGA CCAATAACCT GAAGCGCATT GGCCTGATGG ACGGTACACC AACCGCTACA CCCCAACCGC CTATTGCCTG GCTGAGCTAT AACGTTCACG GCAATGAGGC TGTTAGCTCC GAGGCATTCA TGGATGTGCT TTATCACCTG CTCAGCTCGT CCGATGCCGT GGCAAAAAAA ATCCTGAGCA CTACGGTCGT CATTCTCGAC CCCGGCCTTA ACCCCGATGG CCATGACCGG TATGTGAACT GGTACAACCA GATGCAGGGA CGTGTGGCTG ACCCTACCCC CTCGGCTCGT GAACACAACG AACCCTGGCC GGGCGGGCGC TACACCCACT ACCTATTCGA CCCAAACCGC GACTGGGCCT GGCAAACGCA GGAAATCACC CAGCAGCGTA TGGCCCTCTA CCAGCAGTGG ATGCCCCAGC TACACGGCGA TTTCCACGAG ATGGGGGTTG AAAGTCCGTA CTATTTCGCG CCATCGGCCA AGCCTTATCA CGAAGACGTT ACCCCCTTCC AGCGGCAGTT TCAGCAAACG ATTGGTCAAT ATTGCAGCCG CTACTTCGAT AAAAACGGCT GGCTCTATTA CACCCGCGAA CGATTCGATC TGTTTTACCC AAGCTACGGT GATACCTACC CGACTTATAA CGGCGCCATC GGCATGACCT TCGAACAAGG CGGCAGCGGC CGGGCCGGAC TAGCTATCGA AAAAGCCGAT GGAGATACAC TCACGCTGCG TCAGCGAATT GACCACCATT TTGCCTCCAG CATTGCCACG CTGGAATCCG TAGCCGACCG GCCCGCTGAA ATTGTGAAAG AGTTTGGGCA ATTCTTCGAT AAATCGCGCA ATACGCCCAT TGGTGCCTAC AAAAGCTACG TCATCAAATC CAATGGCGAC GCCGGGCGTA TCAAAGCGCT GCAACAACTG CTGGAGCGAA ACAAAATCAG TTACGGCTAC GCGGGTAAAG CCCAGAATGT AGCCGGTGGG TTCAATTACA CAACTCAGAA AACGGACAAA ACGGTAGCCA TCACAGCCGA TGATATTGTG ATCAGCGCGT ATCAGCCTAA ATCGACTCTG TTAAAAATCC TGTTCGAGCA GAATTCGAAA CTGGAAGATT CGGCAACCTA TGACATTACA GCCTGGTCGC TTCCGTACGC ATTTGGCTTA CAAACGTATG GCCTGACCAC CCGACTCAGT CCGGGAAGCA CCTCACCCGC CACAACCACG CCAGTGGCTT CGGCAACCCC GCAAAGCCGC CCCTATGGGT ACGTCGTTCG GTGGCAGTCA CTCCCGGCGG TCCAAATGCT GGCCGGTCTG CTGAAACAGA AAATACGCGT ACGAGCCGCC GAAAAACCAT TTGAACTGGA GAACAAGACA TACCCATCCG GCACGCTGAT TGTAACCCGG GCGGGCAACG AACGCTTCGG CGACCGATTG GATGCACTGG TTCGGGCGGA AGCCACCCGG ACGGGGGCCG ATTTAACACC CGTTCAGACT GGTTTTGTCA CGACGGGTTC CGACTTTGGC TCCGATTTTG TGTCGGGTCT GAAAGCCCCA CGCGTGGCGG TGGTTGTGGG CGAAGGCACC CCTCCCCCAT CGGCGGGCGA AGTGTGGCAC TACTTCGACC AGGAACTTCA ATACCCCATT ACGCTGGTTG ACGGTAATAC ACTGGGCAAT GTGCAATGGA ACAAACTGGA TGTACTGATT CTGCCGACAA ACTACAATTA CAGCCGCTTC CTGAACGAAA AAAACCTGAC CGCCATCAAA GAATGGGTTC GGGCGGGCGG AAAACTCATT GCCATGGAAC GGGCTGCATC ATTTCTGGCC GGTAAGGATG GGTTCGAGTT AAAAGAAAAA GAAGACAAAT CAGCCGATAA AAGTAAAAAG AGCGAAAACC CTGACACGCT CAAACGTTAC ATAGACCGCG AACGAACTGC GATCTCCGAT GATATTCCGG GCAGCATTTA CCGGGTAAAC ATCGACACCT CACACCCATT GGGTTTTGGT TTGTCGGGCG GTTATTATTC GCTGGTGCAG AATGCTTACA ACTTTGACTA CCTGAAGGAA GGCTGGAACG TTGGGTATCT TAAAACGGAT AACTACGTCG CTGGTTTTTC GGGCAGAAAC GCCAAGGAAA AGCTAAAGAA TACCCTGGTG ATGGGCGTTC AGTCGCTCGG TCGGGGCAGC GTTGTTTACC TGGCCGATGA TCCGCTGTTC CGGGGTTTCT GGTACAACGG AAAGCTCCTG TTCGCCAATG CTGTATTTAT GGTTGGCAAT TAA
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Protein sequence | MKHFLLLAGL TVASLSASAQ STSSSSTSLS PSAAIDSPAK FLGYQIGERF TPHHRVLAYA EQVARQLPNR IKLIPYGTSY EGRQLMVVAI GSEANMSRLE EIRTNNLKRI GLMDGTPTAT PQPPIAWLSY NVHGNEAVSS EAFMDVLYHL LSSSDAVAKK ILSTTVVILD PGLNPDGHDR YVNWYNQMQG RVADPTPSAR EHNEPWPGGR YTHYLFDPNR DWAWQTQEIT QQRMALYQQW MPQLHGDFHE MGVESPYYFA PSAKPYHEDV TPFQRQFQQT IGQYCSRYFD KNGWLYYTRE RFDLFYPSYG DTYPTYNGAI GMTFEQGGSG RAGLAIEKAD GDTLTLRQRI DHHFASSIAT LESVADRPAE IVKEFGQFFD KSRNTPIGAY KSYVIKSNGD AGRIKALQQL LERNKISYGY AGKAQNVAGG FNYTTQKTDK TVAITADDIV ISAYQPKSTL LKILFEQNSK LEDSATYDIT AWSLPYAFGL QTYGLTTRLS PGSTSPATTT PVASATPQSR PYGYVVRWQS LPAVQMLAGL LKQKIRVRAA EKPFELENKT YPSGTLIVTR AGNERFGDRL DALVRAEATR TGADLTPVQT GFVTTGSDFG SDFVSGLKAP RVAVVVGEGT PPPSAGEVWH YFDQELQYPI TLVDGNTLGN VQWNKLDVLI LPTNYNYSRF LNEKNLTAIK EWVRAGGKLI AMERAASFLA GKDGFELKEK EDKSADKSKK SENPDTLKRY IDRERTAISD DIPGSIYRVN IDTSHPLGFG LSGGYYSLVQ NAYNFDYLKE GWNVGYLKTD NYVAGFSGRN AKEKLKNTLV MGVQSLGRGS VVYLADDPLF RGFWYNGKLL FANAVFMVGN
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