| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1780 |
|---|
| Symbol | |
|---|
| ID | 8725517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2151771 |
|---|
| End bp | 2152742 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | thioredoxin reductase |
|---|
| Protein accession | YP_003386624 |
|---|
| Protein GI | 284036694 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.720835 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCCG AACATGTAAA GTGCCTCATT ATAGGTTCAG GCCCGGCCGG TTACACAGCA
GCTATTTACG CAGCACGTGC CAATGTCCAA CCCGTTTTAT ACCAGGGTGG GCAACCCGGT
GGCCAGCTCA CCATCACTAC CGAAGTAGAT AATTTCCCAG GCTACCCCAA TGGCGTACAG
GGCCCGCAGA TGATGCAGGA CCTTGAAGCG CAGGCCCGCC GGTTTGGTAC CGACATTCGA
TACGGTATGG TAACGAAAGT TGTGTTCGCC GACCAGCCCA GCCTCGACAA CCCGCACCGC
GCTATCGTCG ACGACAAACA CGAAATCACG GCTGATTCCA TTATTATATC GACGGGCGCA
TCGGCCAAAT GGCTCGGGCT TCCCTCCGAG ATGCGTCTAA ACGGCCGGGG CGTATCGGCC
TGCGCCGTCT GCGACGGGTT CTTCTTCCGT GGTCAGGATG TGGCCATTGT GGGTGCCGGT
GACACGGCTG CCGAAGAAGC AAGTTACTTG TCCAATATTT GCCGGAAAGT GTATATGCTG
GTTCGCCGAG ACGAAATGCG GGCATCGCAA TTCATGCAGA AACGCGTTAA AACGGCGCAC
AACATCGAAA TTCTGTACAA CACATCTACC GAAGAAGTGC TGGGCGATGA AGATGTAACG
GGCGTACGGG TGAAGAATAG CGAAACGGGC GAAGAACGGA TCTTAGATGT GACCGGCTTC
TTTGTTGCGA TTGGTCACAA ACCCAATACC GATATTTTTC AGGACTACCT TGATCTGGAT
GAAAATGGGT ACATCATCAC CGAAAAAGGC AGTACCCGAA CCAACATACC CGGTGTTTTT
GCCTGTGGTG ACGCGCAGGA TAACATTTAC CGCCAGGCAG TGACCGCAGC CGGAACAGGC
TGTATGGCCG CCCTCGACGC TGAACGTTAC CTGGTCACCC TTGAAATGCA GGGAGAAGAA
ATTGTTCATT AA
|
|---|
| Protein sequence | MTSEHVKCLI IGSGPAGYTA AIYAARANVQ PVLYQGGQPG GQLTITTEVD NFPGYPNGVQ
GPQMMQDLEA QARRFGTDIR YGMVTKVVFA DQPSLDNPHR AIVDDKHEIT ADSIIISTGA
SAKWLGLPSE MRLNGRGVSA CAVCDGFFFR GQDVAIVGAG DTAAEEASYL SNICRKVYML
VRRDEMRASQ FMQKRVKTAH NIEILYNTST EEVLGDEDVT GVRVKNSETG EERILDVTGF
FVAIGHKPNT DIFQDYLDLD ENGYIITEKG STRTNIPGVF ACGDAQDNIY RQAVTAAGTG
CMAALDAERY LVTLEMQGEE IVH
|
|---|
| |