Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1763 |
Symbol | |
ID | 8725500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2122315 |
End bp | 2124426 |
Gene Length | 2112 bp |
Protein Length | 703 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | TonB-dependent receptor plug |
Protein accession | YP_003386607 |
Protein GI | 284036677 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0187171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC GACTACTACT GCCCCTGTTT TGTTTACACG CCTGTATCCA ATCCGTTTCT GCCCAAACCT CAACCCCCTC ACTGGAAGAT ACCCTTCAAC TCAATGAGGT GGTGGTTCGG GGATACGCAA CCAACCGCCG ATTACTGGAA ACACCGGCTT CGATCGGACT TCTGTCGCGC CGGGATTTGA ACCAACGTTT CGGTACGCCA ACGCTGGTGC CGGCGCTGAA CACTTTACCG GGCGTTCGGG CCGATGAACG GTCGCCGGGG AGTTACCGGC TGTCCATACG GGGGAGTGCC ATCCGCTCAC CGTTCGGGGT ACGGAATATC AAGACCTACT GGAATGAACT GCCGCTGACC GATGCAGGCG GCAATACCCC CCTCAACGCG CTGGATGTGC GGGCGCTGGG ACGGATTGAA GTCATAAAAG GGCCGTCGGG CAGTTTGTAC GGGGCCGGAA CCGGTGGCAC CGTGCTGTTC AGCGGATTGG GCGTACCGGC GGGTCAGACT AGTGTGGAAG TATCGGCGCT GGGCGGCAGC TACGGCTTGT ACGGAAATGG CATTTCGGTA CAGACCGGCA AAAACAACTC AGCCATTTCG CTCAACTACA ACCATTTGCA ATCGGATGGG TATCGGGATC AGAGTGCAGT GGTACGGGAC AATCTGAGCC TTGTTGGCTC GTTCAACGTC AGTCCCAAAC GGACCATTTC GGTACTTGCG CTCTATTCTG ACCTGCATTA CCAGACACCG GGTGGCCTCA ACGAAGCACA GTTTCGGGCG AATCCCAGAG CTTCACGCTT TGCCACGGCT ACCTTACCCA GCAGTGCCGC CCAACAGGCC GGTATCTATC AGAAAGTCGG CTACCTGGGC TTTTCGCACG AGTACCGCTG GAACGACCGG ATACAGAACA CCACCGTTAT TTACGGCTCT ACCACCGATT TTGCCAATCC GTTCATTACC AACTACGAAA AACGCACCGA TCAGGGAATT GGCGGTCGCA CCGTCACCCA GATCCGCTTC CCCAACGGTC CCGTGCCAAC CGTCGTTACG GTCGGGGCCG AGTACCTGCG CAACTTCACC GTTGACCGTA ATTTCGGGAA CCGGGGTGGC ATTGCCGATA CCATCCAGAC CGACGAAGAA CTCATTGCCC GGCAGTCGAC GGTTTTCCTA CAATCTGAAA CCGAGCTGCC TGCCCGTTTC CGGCTGACGG CGGGCCTGAG CCGCAATGAT ATTCGGTATG GCTTTACCCG TTTTTCAACG CGGGCGGCTG GTGGTGCCCC GGCCATTCCT CTGACCCGGA ACTTCACACC CGTCTGGCTA CCACGCGTTG CGTTACTGCG CACCTTCGGT CAGAACGTGT CGGCTTTTGT CAGTATCAGC ACCGGGTATT CGGCCCCATC AACGCAGGAG GTACGCCCCT CGGCGGGTGG CTTTAACACC ACGCTGAATG CCGAACGGGG AACGAGTTAT GAGGTAGGCT TACGCGGGTC TGCCTTGCGA AACCGGTTAC GATTCGATGT GGCGGCTTAT CAGTTCCGGC TAACCGAAAC GATTGTTCGC CGGTCGGATG CAGCCGGTGC CGAGTTCTTC GTCAATGCGG GCCGAACCGA CCAGAGAGGA CTCGAAGCTC AGCTCAGCTA CGATTTTCTT TCGCCCGCTT ACTACACATC GCCAACTGCT TTTTTCTCGC TGGTGCGGAT TTGGAACAGC CTGACCCTCA CCGAATATCG GTTCCGGGAT TATAAGCAGG GAACGGCGGA TTTATCCAAC AACAAGGTGC CGGGTGTGGC GCCAACGACT AACGTAACGG GTATTGATGC GGAGACAAAA GCGGGAATTT ACGCACACGT TACGTACCAG TTTCTGTCGC CTTTCTACCT CAACGATGCC AATACCGTAC TCGCCGACCC CACGCAGTTA CTTCAGGCAA CCCTGGGTTT CCGGCACTCG CTTGGCAAAA ACTGGACAAT AGACATTTAC GCCAGTGGCG ACAATCTGCT TGACCGAACC TATTCATTAG GCTACGACCT CAACGCCGTT GGTAATCGGT ATTATAACGC GGCCCCTGCC AGAAACGGTG TTGGTGGCGT TCGGCTGCGG GTGAAATGGT GA
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Protein sequence | MKKRLLLPLF CLHACIQSVS AQTSTPSLED TLQLNEVVVR GYATNRRLLE TPASIGLLSR RDLNQRFGTP TLVPALNTLP GVRADERSPG SYRLSIRGSA IRSPFGVRNI KTYWNELPLT DAGGNTPLNA LDVRALGRIE VIKGPSGSLY GAGTGGTVLF SGLGVPAGQT SVEVSALGGS YGLYGNGISV QTGKNNSAIS LNYNHLQSDG YRDQSAVVRD NLSLVGSFNV SPKRTISVLA LYSDLHYQTP GGLNEAQFRA NPRASRFATA TLPSSAAQQA GIYQKVGYLG FSHEYRWNDR IQNTTVIYGS TTDFANPFIT NYEKRTDQGI GGRTVTQIRF PNGPVPTVVT VGAEYLRNFT VDRNFGNRGG IADTIQTDEE LIARQSTVFL QSETELPARF RLTAGLSRND IRYGFTRFST RAAGGAPAIP LTRNFTPVWL PRVALLRTFG QNVSAFVSIS TGYSAPSTQE VRPSAGGFNT TLNAERGTSY EVGLRGSALR NRLRFDVAAY QFRLTETIVR RSDAAGAEFF VNAGRTDQRG LEAQLSYDFL SPAYYTSPTA FFSLVRIWNS LTLTEYRFRD YKQGTADLSN NKVPGVAPTT NVTGIDAETK AGIYAHVTYQ FLSPFYLNDA NTVLADPTQL LQATLGFRHS LGKNWTIDIY ASGDNLLDRT YSLGYDLNAV GNRYYNAAPA RNGVGGVRLR VKW
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