Gene Slin_0805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0805 
Symbol 
ID8724536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp977778 
End bp978740 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content51% 
IMG OID 
ProductATPase associated with various cellular activities AAA_3 
Protein accessionYP_003385667 
Protein GI284035737 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.485502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTTATT CCTCGGATGT TGCGGCTGCC GAAGCCCTTA CTGCCTCTTA TCAGAAGTTA 
AAAAACGAAA TCTCGAAAGT CGTTATTGGG CAGGACGATA CGGTCCGTTT GCTGCTAACG
GCCATCTTTT GCCAGGGGCA CTGCCTGTTA GTGGGCGTAC CCGGCCTGGC CAAAACGTTG
CTGATTCAAA CGATTGCCGG TGCGCTAGAT CTCGATTTCA ACCGAATCCA GTTTACGCCT
GATCTGATGC CATCCGATAT TCTGGGTTCT GAAACGCTGG ATCAGGAACG CAATTTCAAG
TTTATTAAAG GCCCGGTATT TGCCAATATC ATTCTGGCCG ACGAAATCAA CCGGACTCCG
CCCAAAACAC AGTCTGCTCT GCTGGAAGCC ATGCAGGAGT ATTCGGTCAC GATTGCCGGT
CAAAAATACG CTTTAGGTCG GCCGTTTTTC GTTCTGGCTA CTCAAAACCC GATTGAGCAG
GAAGGTACCT ACCCGCTGCC CGAAGCCCAG CTAGACCGGT TTATGTTCAA TATTTATCTG
GACTATCCAT CGTATCAGTC GGAACTGGAT ATCGTTAAAA ACACAACCTC CGACAAACGG
TACGATGTCC AGCGCGTTAT CACGGGTGAG GAAATTCGGG AGTTTCAACA ACTCGTTCGT
CGGGTACCGG TTGTCGATAA TGTGGTTGAA TACGCCGTTA AGCTTGTTCA TAAAACTCGC
CCAAACACCG AAATGGCTGC TTCCGACGCC AATCAGTATC TGGAGTGGGG CGCAGGGCCA
CGGGCTTCGC AAGCGCTCAT TCTGGCGGCA AAATGCAATG CCCTGCTGAC GGGTAAGTAC
TCGCCCGATA TTGAAGACGT TCGGGCCGTA GCACTTCCAA TTCTGCGTCA CCGGGTGGTG
CGTAACTTCA AAGCCGAAGC GGAAGGTATT TCAGTAGAAC AGTTGATCAA ACGACTGTTG
TAA
 
Protein sequence
MPYSSDVAAA EALTASYQKL KNEISKVVIG QDDTVRLLLT AIFCQGHCLL VGVPGLAKTL 
LIQTIAGALD LDFNRIQFTP DLMPSDILGS ETLDQERNFK FIKGPVFANI ILADEINRTP
PKTQSALLEA MQEYSVTIAG QKYALGRPFF VLATQNPIEQ EGTYPLPEAQ LDRFMFNIYL
DYPSYQSELD IVKNTTSDKR YDVQRVITGE EIREFQQLVR RVPVVDNVVE YAVKLVHKTR
PNTEMAASDA NQYLEWGAGP RASQALILAA KCNALLTGKY SPDIEDVRAV ALPILRHRVV
RNFKAEAEGI SVEQLIKRLL