Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0420 |
Symbol | |
ID | 8724148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 524951 |
End bp | 526222 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | AAA ATPase central domain protein |
Protein accession | YP_003385283 |
Protein GI | 284035353 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.781835 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACAG ACTCAACGCC ACTACCCGAG CGGGTGCGCC CACAAACACT GAATGATGTT ATTGGCCAAC GTAAGCTGAT TGGCCCAACG GGCGCACTTC GGCGGGCGGT AGATGCCGGA CGTTTACCAT CCATGATATT ATGGGGGCCG CCGGGTGTGG GTAAAACGAC ACTGGCTCTT TTGCTGGCAG AGGCCGTTAA GCGGCCATTC ATTGCGCTGA GTGCCATAAA CTCGGGCGTA AAAGAGATTC GTGACGTACT GAGTCGACCC AGCGGGATGT TTCCGCCGGT TGTTTTCATC GACGAAATTC ACCGTTTCAA CAAAAGCCAG CAGGACGCAC TGCTGGGTGC CGTTGAGAAA GGACAGATTA CCCTCATTGG TGCCACGACC GAAAACCCAT CGTTCGAAGT AAACAGCGCG TTGCTATCAC GCTGTCAGGT ATACATCCTC GAAGCCTTAA GTCGTGAAGA GCTTATCCAG CTCGTAGACC GGGCTATTGC ACAGGATAGG TTTTTGCAGT CGAAACAGAT TACTGTTGAG TCGTATGACG CCCTTTTACG GCTATCGGGT GGCGACGGGC GCAAGCTGTT AAACCTGCTG GAACTGGTGG CATCGGCACA TGTGGCGGCT GAACCGTTGG TTATAACGGA TGAAGGTGTA ACGGCTGTAG CCCAGCAAAA CATTGCCCGG TATGATAAAT CCGGGGAACA GCATTACGAT ATTATTTCGG CCTTTATCAA GTCGCTGCGT GGTTCCGACC CCAATGCCGC CCTGTACTGG ATGGCTCGCA TGATCGTGGC GGGTGAAGAC CCGATCTTTA TTGCCCGGCG TATGCTCATC ATGGCATCGG AAGATATTGG CAACGCCAAC CCAACGGCTA TGATTATGGC TTCCGAAGCG GTACAGGCTA TTCGGGCCAT TGGTATGCCC GAAGGCCGGA TAATTCTATC GCAGGTGGCA GTATATCTGG CTACATCACC CAAGAGCAAT GCGAGTTATG TAGCCATCGA CGAGGCTATG GCGCTGGCTG AGCAGACGGC CCATTTGCCC GTGCCTTTAC ATCTGCGCAA TGCACCCACC AAACTGATGA AACAGATTGG CTATGGAAAA GAGTATCAGT ATGCCCACGC CCACGAAGGA AACTTTGCCC AGCAGAACTT TCTGCCCGAC GATCTAAAAG GGCATAAACT CTATGAACCC GGTCATAACG CCCGCGAAGC CGAAATCCGA CGGAGCCTGC AAAAATGGTG GGGCGACTGG TATGGCTATT AA
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Protein sequence | MNTDSTPLPE RVRPQTLNDV IGQRKLIGPT GALRRAVDAG RLPSMILWGP PGVGKTTLAL LLAEAVKRPF IALSAINSGV KEIRDVLSRP SGMFPPVVFI DEIHRFNKSQ QDALLGAVEK GQITLIGATT ENPSFEVNSA LLSRCQVYIL EALSREELIQ LVDRAIAQDR FLQSKQITVE SYDALLRLSG GDGRKLLNLL ELVASAHVAA EPLVITDEGV TAVAQQNIAR YDKSGEQHYD IISAFIKSLR GSDPNAALYW MARMIVAGED PIFIARRMLI MASEDIGNAN PTAMIMASEA VQAIRAIGMP EGRIILSQVA VYLATSPKSN ASYVAIDEAM ALAEQTAHLP VPLHLRNAPT KLMKQIGYGK EYQYAHAHEG NFAQQNFLPD DLKGHKLYEP GHNAREAEIR RSLQKWWGDW YGY
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