Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0057 |
Symbol | |
ID | 8723785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 68684 |
End bp | 69709 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | |
Product | protein of unknown function DUF262 |
Protein accession | YP_003384929 |
Protein GI | 284034999 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.542599 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.294632 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGATA ATTTTGAGCT AAATAAAAAT TCAATTGCAG ATTTAAGGTA TAACCTTAAT TATTATGGTG CCGACTATCC TGTTGATGCA TTAGTCAAAA GAATGAAGGA TGAGGAGTTT ATTTTTCCGA ATTTCCAAAG GCAATATGTT TGGCATGTTG ATGAAGCTTC AAGATTTATT GAATCTTTAC TTTTGGGATT ACCTGTCCCT TCAATATTTC TTGCAAAGGA CAAATATTCA AGCAAATTAA TTGTTATTGA TGGACAGCAA AGACTAAGAA CCCTTCAGTT TTTTTACGAA GGTAAATTTC CTGACGGGAA AGCGTTTAAA TTAAAAAGTG TAATTTCAGA ACTTATAGGA AAGACATATT ATGACTTACC AGTAGAGGAT AGATTTACTC TAGACAATAC GATAATTCAC TGTTTAGTGA TTTCCGAAAA CGAAAAATCG GACAGTATTT TTTATCTTTT TGAGAGGCTA AATACTACTG GAACCCCATT GACAAATCAA GAAATTAGAA ATGCAATTTA TCATGGAGAA TTTAATGATT TTTTATACAA AATTTCTCAA AGTGAAATAT GGAAGTCTTT GTATCATAAA GAAGAAATTC GACTAGAAGA CCAAGACTTA ATTTTAAGAT TTATTGCTTT AAATTTCGAG CTGGAAAGCT ATTCTGGAAA CATGAATGAA TTCCTGAATA GATTCATGTT TCATAACAGG AATTTTGACC TGATAAGTAG AACTTTAGTT GAACAAGCAT TCTTTAGCAG TTTCAATGCA ATAAAGGAAG CTATCGGAGA AGATGCTTTC TACTTTAAAA AAACTTTTAA TCGTCCATTG TATGAAACTT TAACGCTAAC AGTATCAAGG AATCATCTTC AAAACAAGAA CACCCTTGCC GAATTTTACA AAATATTAAT TAGCAGCGAT GACTTTTGGC TTATGACTAA GAGCTCTACA ACAAGCAAGA AAAGTATAAT GACAAGGATT GAATTTGCTA ACCATTTATT ATCACAAATA ATATAA
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Protein sequence | MEDNFELNKN SIADLRYNLN YYGADYPVDA LVKRMKDEEF IFPNFQRQYV WHVDEASRFI ESLLLGLPVP SIFLAKDKYS SKLIVIDGQQ RLRTLQFFYE GKFPDGKAFK LKSVISELIG KTYYDLPVED RFTLDNTIIH CLVISENEKS DSIFYLFERL NTTGTPLTNQ EIRNAIYHGE FNDFLYKISQ SEIWKSLYHK EEIRLEDQDL ILRFIALNFE LESYSGNMNE FLNRFMFHNR NFDLISRTLV EQAFFSSFNA IKEAIGEDAF YFKKTFNRPL YETLTLTVSR NHLQNKNTLA EFYKILISSD DFWLMTKSST TSKKSIMTRI EFANHLLSQI I
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