Gene Slin_0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0057 
Symbol 
ID8723785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp68684 
End bp69709 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content31% 
IMG OID 
Productprotein of unknown function DUF262 
Protein accessionYP_003384929 
Protein GI284034999 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.542599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.294632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGATA ATTTTGAGCT AAATAAAAAT TCAATTGCAG ATTTAAGGTA TAACCTTAAT 
TATTATGGTG CCGACTATCC TGTTGATGCA TTAGTCAAAA GAATGAAGGA TGAGGAGTTT
ATTTTTCCGA ATTTCCAAAG GCAATATGTT TGGCATGTTG ATGAAGCTTC AAGATTTATT
GAATCTTTAC TTTTGGGATT ACCTGTCCCT TCAATATTTC TTGCAAAGGA CAAATATTCA
AGCAAATTAA TTGTTATTGA TGGACAGCAA AGACTAAGAA CCCTTCAGTT TTTTTACGAA
GGTAAATTTC CTGACGGGAA AGCGTTTAAA TTAAAAAGTG TAATTTCAGA ACTTATAGGA
AAGACATATT ATGACTTACC AGTAGAGGAT AGATTTACTC TAGACAATAC GATAATTCAC
TGTTTAGTGA TTTCCGAAAA CGAAAAATCG GACAGTATTT TTTATCTTTT TGAGAGGCTA
AATACTACTG GAACCCCATT GACAAATCAA GAAATTAGAA ATGCAATTTA TCATGGAGAA
TTTAATGATT TTTTATACAA AATTTCTCAA AGTGAAATAT GGAAGTCTTT GTATCATAAA
GAAGAAATTC GACTAGAAGA CCAAGACTTA ATTTTAAGAT TTATTGCTTT AAATTTCGAG
CTGGAAAGCT ATTCTGGAAA CATGAATGAA TTCCTGAATA GATTCATGTT TCATAACAGG
AATTTTGACC TGATAAGTAG AACTTTAGTT GAACAAGCAT TCTTTAGCAG TTTCAATGCA
ATAAAGGAAG CTATCGGAGA AGATGCTTTC TACTTTAAAA AAACTTTTAA TCGTCCATTG
TATGAAACTT TAACGCTAAC AGTATCAAGG AATCATCTTC AAAACAAGAA CACCCTTGCC
GAATTTTACA AAATATTAAT TAGCAGCGAT GACTTTTGGC TTATGACTAA GAGCTCTACA
ACAAGCAAGA AAAGTATAAT GACAAGGATT GAATTTGCTA ACCATTTATT ATCACAAATA
ATATAA
 
Protein sequence
MEDNFELNKN SIADLRYNLN YYGADYPVDA LVKRMKDEEF IFPNFQRQYV WHVDEASRFI 
ESLLLGLPVP SIFLAKDKYS SKLIVIDGQQ RLRTLQFFYE GKFPDGKAFK LKSVISELIG
KTYYDLPVED RFTLDNTIIH CLVISENEKS DSIFYLFERL NTTGTPLTNQ EIRNAIYHGE
FNDFLYKISQ SEIWKSLYHK EEIRLEDQDL ILRFIALNFE LESYSGNMNE FLNRFMFHNR
NFDLISRTLV EQAFFSSFNA IKEAIGEDAF YFKKTFNRPL YETLTLTVSR NHLQNKNTLA
EFYKILISSD DFWLMTKSST TSKKSIMTRI EFANHLLSQI I