| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1189 |
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| Symbol | |
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| ID | 8709033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1396220 |
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| End bp | 1397152 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646483279 |
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| Product | glycosyltransferase, group 2 family protein |
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| Protein accession | YP_003374386 |
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| Protein GI | 283783632 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCTG TCGCAGTGCT GCTGCCGTGC TATAACGAGG CAATCACCAT TGAAAAAGTT
GTTAAAGACT TTAAGGCGGC ACTTCCAGAA GCAACGATAT ACGTGTACGA CAACAACTCA
ACGGACAATA CTGCAAAAAT AGCCAAAGAA GCAGGTGCTG TAGTTCGCAA AGAACCTAGA
CAAGGCAAAG GCAATGTGAT TCGTGCAATG TTCCAAGACA TAGACGCAGA TGTTTACGTA
ATGGCAGACG GCGACGACAC ATATCCCGCT GAAGCGGCAC CAAACATGGT CGCCAAAGTT
ATTGAAGGCT ACGACATGGT TATTGGCGAC CGTCTAAGTT CTACGTATTT CCAAGAGAAT
AAGCGACCAT TCCACAATTT TGGAAATCGT TTAGTTAGAG GCGCAATCAA CACGCTTTTC
CACGCAAAAG TAACTGATAT TATGACAGGC TATCGCGCTT TTTCTTTTTC ATTCGTAAAG
ACTTATCCTG TACTTTCGCG CGGATTCGAA GTTGAAACAG AAATGACTAT TCATTCACTC
AACAACAATA TAAAACTGTA CGAAATGCCA ATTCAGTATC GTGACCGCCC AGAAGGATCA
GTTAGCAAGC TAGACACAGT TGGAGACGGT ATTCGAGTGC TTTCAACCAT TTTTCACATG
ATTCGCGAAT ACAAACCAAT GCCTTTCTTT GGAACACTTG GCGTAATAAT AACACTGTGC
GGAGTAGGAG CATGCATGCT TCCATTCATA GAATTTTGGC GCACACACCT AGTAACACGC
TTCCCTACTC TAATTGGTGC TGTAATGCTA ATTATTACAG GATTACTATT CTTTATTTCC
GGAATTATTC TTGAGATTTT AGCCAAAAAT GAGCGCAAAC GTTTTATAGA ACAAGTAAAC
CTTTTTGATT ACATAAAAAG AAATAGAAAG TAG
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| Protein sequence | MTSVAVLLPC YNEAITIEKV VKDFKAALPE ATIYVYDNNS TDNTAKIAKE AGAVVRKEPR
QGKGNVIRAM FQDIDADVYV MADGDDTYPA EAAPNMVAKV IEGYDMVIGD RLSSTYFQEN
KRPFHNFGNR LVRGAINTLF HAKVTDIMTG YRAFSFSFVK TYPVLSRGFE VETEMTIHSL
NNNIKLYEMP IQYRDRPEGS VSKLDTVGDG IRVLSTIFHM IREYKPMPFF GTLGVIITLC
GVGACMLPFI EFWRTHLVTR FPTLIGAVML IITGLLFFIS GIILEILAKN ERKRFIEQVN
LFDYIKRNRK
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