| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0583 |
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| Symbol | hflX |
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| ID | 8709138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 634409 |
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| End bp | 635947 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482692 |
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| Product | GTP-binding protein HflX |
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| Protein accession | YP_003373819 |
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| Protein GI | 283783065 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2262] GTPases |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.622699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGGATA GTAATGTGGC ATCCGGGCGA GATGATGTGC TTAATTCAAA CGATTTTTCC
TCCCTCGAAA ATGATTCTAA TAATATGAAT GAGCATAATC TCACCAATAA TGCAGTGCTT
TATGCTCATT CGGATGTGCT TCTAGACACT ACTTCTGACA GTGAAAAGCA TGATGAAGTT
TGGCAGGAGC GTGAATCTCG TAATGCTTTA AAGCGAGTAG CTGGTCTTGG CGAATTACAA
GATGTTACCG AAGTTGAGTA TAGAAAGCTT CGTCTTGAGC GCGTTGTGCT AGTAGGAGTG
TGGTCTAGCG CAAAAGGAAC TCTTGCTCAA GCTGAAGAAT CGTTGCGTGA GCTTGCAGCG
TTGGCACAGA CTGCTGGTGC TGTTGTTTGC GATGGCATGT TGCAACAAAG ATATAGGCCG
GATGCTGCAA CTTATGTTGG TTCAGGTAAA GCGCGTGAGC TTGCAGCAGT AGTTGCTCAG
CATGATGCGG ATACGATTAT TGTTGACGAT GATTTACCTC CTAGCCAGCG TAGAGCTTTA
GAAGATGCGA CTAAAGTTAA GGTTGTCGAT CGCACTGCTG TTATTTTGGA TATTTTTGCT
CAGCACGCTA CAAGCCGTGA AGGTAAAGCT CAAGTTGAGC TTGCTCAATT GCAATATATG
CTACCTAGGT TAAGAGGCTG GGGTGCTGCT CTTTCTAGGC AGGCTGGTGG TAGAGCTGCA
GGAGATGCTG GTATTGGTTC TAGAGGTCCT GGCGAAACTA AAATCGAAAT GGATCGTCGA
GCTATTCGCA ATCGTATTTC TAAACTTCGT CACGATATTG CGAATATGGC ACCTGCGCGC
GATGTAAAAC GTGGTTCTCG TAGACGACAA GATATTCCAA CTGTAGCTGT TGTTGGATAT
ACGAATGCTG GCAAGTCGTC TATTATAAAT CGCCTTACTG GATCACAAGA ATTAGTAGAA
AATGCACTGT TTGCAACTCT TGATACTGCA GTACGTCGTT CTCAAACTCA AGATGGTAGA
AGCTATACTT TGGTAGATAC TGTTGGTTTT GTTCGCAGAC TTCCAACTCA ACTAGTTGAA
GCATTTAAAT CCACTTTGGA AGAAGTTGGA CAAGCAGATG TTATTTTACA TGTAGTTGAC
GGTTCGCATC CAGATCCTAT TTCGCAAATT AATGCAGTAA ACGAAGTTCT CGCTAATATT
TCTGGTGTAG AAGATATACC TCAAATTATG GCATTGAATA AATCAGACAT GATGAGTGAT
GCTGCGCGAG AACGTTTTTC TTCTCTTTAT TCTGATGCCG TTATTGTTTC TGCATTTAGT
GGCGAAAATT TGCAAATATT GCGCAATCGT TTAGAAGAAT TGTTACCGTC TCCTCGTGTT
CGTGTAGATG TAACTTTGCC GTACGAGTTT GGTGGATTAT TATCAAAAGT TCGTGAAAAT
GGTGTAGTTG AAAAAGCAGA ATATGTAGAT TCGGGGGTTG AACTTATTGC TTGGGTTGGA
CCATCGTTAG CTGCAAAACT TATGAAAGTA GCGTTGTAA
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| Protein sequence | MADSNVASGR DDVLNSNDFS SLENDSNNMN EHNLTNNAVL YAHSDVLLDT TSDSEKHDEV
WQERESRNAL KRVAGLGELQ DVTEVEYRKL RLERVVLVGV WSSAKGTLAQ AEESLRELAA
LAQTAGAVVC DGMLQQRYRP DAATYVGSGK ARELAAVVAQ HDADTIIVDD DLPPSQRRAL
EDATKVKVVD RTAVILDIFA QHATSREGKA QVELAQLQYM LPRLRGWGAA LSRQAGGRAA
GDAGIGSRGP GETKIEMDRR AIRNRISKLR HDIANMAPAR DVKRGSRRRQ DIPTVAVVGY
TNAGKSSIIN RLTGSQELVE NALFATLDTA VRRSQTQDGR SYTLVDTVGF VRRLPTQLVE
AFKSTLEEVG QADVILHVVD GSHPDPISQI NAVNEVLANI SGVEDIPQIM ALNKSDMMSD
AARERFSSLY SDAVIVSAFS GENLQILRNR LEELLPSPRV RVDVTLPYEF GGLLSKVREN
GVVEKAEYVD SGVELIAWVG PSLAAKLMKV AL
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