Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0224 |
Symbol | pstB |
ID | 8709045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | + |
Start bp | 250464 |
End bp | 251243 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646482343 |
Product | phosphate ABC transporter, ATP-binding protein |
Protein accession | YP_003373485 |
Protein GI | 283782731 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1117] ABC-type phosphate transport system, ATPase component |
TIGRFAM ID | [TIGR00972] phosphate ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCAAC GAATTGATGT GAAGCATCTT AATATTTACT ATGGTGATTT TCTTGCTGTA GAAGATGTGA ATATTAATAT TGAGCCAAAT AAAGTGACGG CTTTTATCGG ACCTTCCGGA TGCGGAAAAT CAACAGTTTT GCGCACTTTA GACCGCATGC ACGAAATCAC TCCTGGCGCG CGAGTAGAAG GTCAAGTGCT TCTTGAAGGC CGCGATTTAT ACGGTAAAGA CGTGGATCCT GTGGCTGTCC GCCGCGATGT TGGCATGGTT TTCCAGCGTC CAAATCCTTT CCCAACAATG TCTATTCGAG AAAACGTGCT CGCTGGAGTT CGTTTGAATA ATCGCAAAAT TGCTAAGAGT GATGCTGACG ATTTAGTTGA GTGGGCTTTA CGAGGCGCGA ACTTGTGGAA TGAAGTTAAG GATCGCTTAG ATAAGCCGGG TATTGGTCTT TCTGGCGGTC AGCAGCAGCG ACTTTGCATT GCTAGGGCTG TGGCTGTGCA TCCGCAAGTT TTACTTATGG ACGAGCCTTG CTCAGCTCTT GACCCTATTT CTACGTTGGC TGTAGAAGAT TTGATTAATG AGCTTAAGCG TGACTACACG ATTGTGATCG TGACGCATAA TATGCAACAG GCTGCGCGTG TTGCGGATTA CACGGCATTC TTTAATTTGA AAGCTGTAGG TCAACCTGGT CATCTGGAAT ACTTTGCAGA CACAACTACT ATGTTCAACA ATCCGCGCAA TGCTGAAGCT GAGCGTTATA TTTCCGGTCG TTTTGGCTGA
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Protein sequence | MGQRIDVKHL NIYYGDFLAV EDVNINIEPN KVTAFIGPSG CGKSTVLRTL DRMHEITPGA RVEGQVLLEG RDLYGKDVDP VAVRRDVGMV FQRPNPFPTM SIRENVLAGV RLNNRKIAKS DADDLVEWAL RGANLWNEVK DRLDKPGIGL SGGQQQRLCI ARAVAVHPQV LLMDEPCSAL DPISTLAVED LINELKRDYT IVIVTHNMQQ AARVADYTAF FNLKAVGQPG HLEYFADTTT MFNNPRNAEA ERYISGRFG
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