Gene Sros_7956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7956 
Symbol 
ID8671281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8769464 
End bp8770342 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content70% 
IMG OID 
Producthaloalkane dehalogenase 
Protein accessionYP_003343354 
Protein GI271969158 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTTC AACCTGTTCT CGACTCGACG ATCTCCTACC GGGAGGCCGG CACCGGGGTG 
CCGATGGTTT TCCTGCACGG CAACCCGACG TCGTCACATC TGTGGCGGCA CATCATGCCG
GCCATGGGAG ACTCCGGCCG GCGTCTGGCG CCGGACCTGA TCGGCATGGG CGAGTCCGGT
AAGCCGGACA TCGCCTACAC CTTCGACGAC CATGCCCGAT ATCTGGACGC GTGGTTCGAC
GCGCTCGGCC TCGACGACGT CGTGCTGATC GGACACGACT GGGGCGGGGC CCTCGCCTTC
GACTGGGCCG CCCGCCATCC CGGACGGGTG CGCGGCATCG CGTTCACCGA GACGATCGTG
AAGCCGATGT CCTGGCAGGA GTTCCCCGAG GGCGGCCGCG GGCTGTTCGA GGCGATCAAG
ACGCCCGGGG TGGGCGAGGC GATGATCCTG GACGAGAACA TGTTCATCGA GCAGGCGCTG
CCGGGCACCG TCGTCACCCC GCTCGGCGAG GAGGACCTCG ACACCTACCG CAGGCCGTAC
CCCACCCGCG ACAGCCGCAG GCCGCTGCTG CAGTGGCCGC GAGCGATGCC CCTGGGCGGG
GAGCCGGCCG ACGTGGTGGC CAGGATCGAG TTCTACGACG AGTGGCTGGC GGCCAGCGTC
GAGGTGCCCA AGCTGCTGAT CACCTTCGCG CCCGGCCCCG GGGCGATGAT GGGGCCGGAG
ATCATCGACT GGTGCGCCGC CAACATGGCC GGCCTCGAGA TCGACGAGCA TCCGATGCCC
GCCGGCCACC ACACCCCCGA GGACCAGCCC GAGGCGATCG CCGCCTCCAT CGTGACCTGG
GCGGACAAGC ACGACCTGCG CTCGGACGCC CGGAGCTGA
 
Protein sequence
MPVQPVLDST ISYREAGTGV PMVFLHGNPT SSHLWRHIMP AMGDSGRRLA PDLIGMGESG 
KPDIAYTFDD HARYLDAWFD ALGLDDVVLI GHDWGGALAF DWAARHPGRV RGIAFTETIV
KPMSWQEFPE GGRGLFEAIK TPGVGEAMIL DENMFIEQAL PGTVVTPLGE EDLDTYRRPY
PTRDSRRPLL QWPRAMPLGG EPADVVARIE FYDEWLAASV EVPKLLITFA PGPGAMMGPE
IIDWCAANMA GLEIDEHPMP AGHHTPEDQP EAIAASIVTW ADKHDLRSDA RS