Gene Sros_7621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7621 
Symbol 
ID8670942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8413629 
End bp8414825 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content74% 
IMG OID 
Productmajor facilitator superfamily permease 
Protein accessionYP_003343038 
Protein GI271968842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.262333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAATG ACAATCAACG TGCCCGCATC GCGATCACGG CCGTGTTCGC CGCCCACGGC 
GCGGTCTCCG GAAGCATGGC GACCCGTATC CCGTGGCTGC AGGAGCACCT CCAGCTCGGC
CCGGCCGCTC TCGGACTCGC CCTGTTCTGC CCCGCCGTCG GCGCCTTCGT CGCCATGCCG
ATGGCCGGGC GGCTGGTCCA CCGCTACGGA GGCCGTGTCG CCACGCGGGT CCTGATCGCC
TTGTGGTGCG CGGCACTCGC CCTTCCCGCG CTCTCCCCCG GGCTGCCCTG GCTGTGCGCC
GCGTTCCTCG CGTACGGCGC GGCGGCCGGC ATGTGCGACG TCACGATGAA CGCGCAGGGA
GTGATCGTCG AGCGGCGCCT GGAGCGCTCG ATCATGTCCG GGCTGCACGG CATGTGGAGC
GTGGGCAGCC TGGCCGGGGC GGGGATCGGA GTGGTCGCGG CGCACGCCGG GATCGACGCG
CGCGTCCACC ACTCCGCGGC GGCGCTGGCA CTGCTGGTCT TCGGAGTCAT GGCGAGCCGT
GGCCTGCTGG ACACCCGGCC CGAGCCCGGC GAGCAGGCGC CGCCCCGGTT CGCCGCGCCC
TCGCGGGCGA TCCTCGCCAT CGGCGCCGTC GGATTCTGCG CCACCTTCGC CGAGGGCGCC
AGCATGAACT GGGCCGCCGT CTACGTCAAG GACGTCACCG GCGCCGGTCC GGGCGTCGCC
GCCGCCAGCT ATGCGATCTT CGCCCTGGCC ATGGCGGTCA CCCGGCTGGC CGGCGACCTG
ATGATCCGCA GGCTCGGACC GGTCGTGACC GTCCGCGCCG GCGGCCTGCT CGCCACCCTC
GGCGGAGCCG TGATCGTCAT GGCCCGCACC CCGGTGCCGG GAATCATCGG GTTCGCCCTG
CTCGGACTCG GGGTGGCCGT GATCGTGCCG CTCTGCTTCG CCGCCGGCGG CAACGCCACC
GCGACGCCCA GCCTGGGGGT CGCGGGAGTC GCGACGATCA CCTACCTGTC CGGGCTCATG
GCCCCCGCCG TCACCGGCTG GATCGCCGAC GTGACCTCGC TGCCCGCCAC GTTCGGCCTC
ATCGCGGTCA TCACCCTGGC GGGTGCCCTC CTCGCCGGAG CCCTGCGCCC CGCGGCCCTC
GCCTCCGGGG GAGCGGGACC GCGCGCCCGT GACCCGCATG ACGCGTCGCG CGGATGA
 
Protein sequence
MRNDNQRARI AITAVFAAHG AVSGSMATRI PWLQEHLQLG PAALGLALFC PAVGAFVAMP 
MAGRLVHRYG GRVATRVLIA LWCAALALPA LSPGLPWLCA AFLAYGAAAG MCDVTMNAQG
VIVERRLERS IMSGLHGMWS VGSLAGAGIG VVAAHAGIDA RVHHSAAALA LLVFGVMASR
GLLDTRPEPG EQAPPRFAAP SRAILAIGAV GFCATFAEGA SMNWAAVYVK DVTGAGPGVA
AASYAIFALA MAVTRLAGDL MIRRLGPVVT VRAGGLLATL GGAVIVMART PVPGIIGFAL
LGLGVAVIVP LCFAAGGNAT ATPSLGVAGV ATITYLSGLM APAVTGWIAD VTSLPATFGL
IAVITLAGAL LAGALRPAAL ASGGAGPRAR DPHDASRG