Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5515 |
Symbol | |
ID | 8668809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 6031935 |
End bp | 6034574 |
Gene Length | 2640 bp |
Protein Length | 879 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | response regulator receiver protein |
Protein accession | YP_003341014 |
Protein GI | 271966818 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0430285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.701277 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCTGC TGGGCGCGCC GGGAACGGGC AAGAGCGCGA TGCTCGACTT CGCGGTGGAC CAGGCGGAGG GGTTCGTCGT GCTCAGGACC CGCGGCGTCG AGGCGGAGTC CGCGCTGCCC TGCGCCGGAC TGCACGGCCT GCTCCGCCCG GTCATGGACC GGCTGCCCGC GCTGCCCGGA GCGCAGGCGG AGGTGCTCAC GCGGGCGCTG GAACTGGGGG CGGCCGGCGG CGGGCTGGCG CTGCCCGCCT CGGTTCTCAA CCTCCTGGCG GCCGTGGGGA GGCCGGTGCT GGCCTGCGTC GACGACGTCC ACCATCTTGA CGCGCCCAGC CGCGAGGCGC TCTTCTTCGC GGCCAGGCGC CTGGCCGGGG AGCAGATCGT GCTGCTCTTC GGGGCGCGCG CCGGCGGCAC CGCCCCGGAG GGCATCCCGG AGCTCCGGCT GGGAAGTCTC GACGAGGACG CGTGCCGGCT GCTGGCCGAC GATCTGGCGC CGGAGGGGCT CGGCGCGGAG CTGCGGGCGT CGCTGATCGA GGTCGCCCGG GGCAATCCCC TCGCCCTCGG CGAGCTCGTC GGATCGCTCA GCGCGGCCCA GATGGCCGGC GCCGCCGCTC CGCCCGACAC GCTTCCGCCG GGCGGGCGGC TGTGGCGTGC GTACGCGGAT CGGCTGGCCC GGTTGCCCGC GGAGACCGGG AACCTGCTCC TGCTGCTGGC GGCCGACCCG GACCTGGACA TGGCCGCGCT GGTCCGGGCC GCCGAACCGG CCTGCGCCCT CACCCTGCTC GAACCGGCCG AGCGCGCGGG CATCCTCGTC AGCGCGGCCG GAGACCGCCA TGACTTCCGG GACCCGGCGA TGCGGTCGGT GGTCTACGCC GAGGCCTCAG CCGCCCGCAG GCGGGCGGCG CACCGCCTGC TCGCGAGCGT TCTCGACCAT GATCACCAGC GGCTGCGGCG GGCATGGCAC CGGGCCGTCT CGCTGGACGG CCCCGGTGAC CGGCTGGCCG ACGAGCTGGC CGCGGCGGCC TCCGCGGGCT CCACGGGCTC CCGCGGAGGT TACCCGGCGC CCTGGCTCGC CTTCGAACGG GCCGCCGAGC TCACGGCCCG CGGCGACGTC AAGGCCGCCC GCCTGGCCGC CGCCGCCCAC CGGGCATGGC ACGCGGGGCT CCCGCAGCGC GCCAGGTCGC TGCTCACCCG CCTGTGCTCC CTGACGGTGT CGGAGGAGAC GCGGGGCCAG GCCGAGTTGA TCCGGGGCAG CCTGGAGCTG CGCAGCGGGA AGACGGGCAG CGCCCGTGAC GAGCTCCTTT CGGCGGCCGG TTGGCTGCTC GACCGGGACC GCGGGCGGGC CGTCCGCGCG CTCCTGCGCG CGAGTGAGGC CAGCTATCTG GCCGGGGACA GCTCCCGGTT CCTGGCCATA GCCCGGCAGG CCGCCGCGCT ACGCCGTCCG GACGATCCGG CGGCCACCCA GCTGATGTTC GAGTATCTGG CGGGCATCGC GGCGACCTTC CGCGGCCGGC ACCGGGAGGC GGCGGATCCG CTCCGCCGGG TCCTGGAGCT CGCCCCCTCG GTGGGCAACC CGTCGGTGCT GGTCTGGGCG GGCGTCGCCA GCCTGCTGCT CGGCGACGAC GTCCAGGCGC TCAGGCTGTC GACCCGGGCC GTGGAGGCCG CACGCGTCCG GGGAGCCGTC TCCGCGGTGC CGCAGGTGCT GGAATTCATG ATCCAGACCG AGATCTGGAT GGGCCGCTAC GCCTCGGTCA CCGCCAACGC GGTCGAGGGC CTCCGGCTGG CCCAGGAGTC CGGCCAGCCC AACAGCGCGG GCCAGCACCT GGCCTGGCTC GCCCTCACCT CGGCGGTCGA GGGTGACGAG GAGACGTGCC GGATCAGGGC CGGCGGCGCC ATCGAGCTGG CGGGCGCCCA CGGCCTGGGC GTCGCCGGAG CGCTCGGCAA CTGGGCGCTG GCCCACCTGG ATCTCGCCGC GGGACGCCAC GCGGGCGCGG CGAAGCGGCT ACGGGCGACG GCCCGGCCGG ACGGCACGAA CGGCCACCTC GTCGTGCGCG TCATGGCGAC CCCTCATCTC GTCGAGGCCG CCGTGCGGAC GGGCGAGCAC GAGCAGGCGC GGGCGGCGTT GCGGGTGCTC GACCGCTGGG CGGGCAGCAC CCGCAGCCCC GACCGGCTGG CGCTGGCGGC GCGCTGCCAC GCGCTCCTGG CCGCCCCCGG GGAGGCCGAG GAGCGGTTCC GCGACGCGCT GGACCTGCAC CACCAGGGAT TGTGCGAGTT CGAGACGGCA CGCACCCAGC TGCTGTTCGG CAGCGTGCTG CGCCGTAACC GGCGTCCCGG CGCGGCCAGG GAGCATCTGC ACAGCGCGCT GGAGACGTTC GAGCGATCCG GGGCGCGGCT CTGGACCGAG CAGGCGCGCG CGGAGCTGCG CGGGGCAGGG GAGGCCGTCC GGTCACGCGG CCACAAGGCC GCGGAGAAGC TGACGGCGCA GCAGTTCCAG ATCGCGCGGA TCGTCGCCGA CGGCGCCACC AACCGGGAGG TGGCGGCCCG GCTCTACCTG AGCCCGCGCA CCGTCGAGCA CCACCTCAGG AACATCTTCG CCAAGCTCGA CATCCGTTCC CGGGTGGAGC TGGTCCGGCT GCTGTCCTGA
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Protein sequence | MVLLGAPGTG KSAMLDFAVD QAEGFVVLRT RGVEAESALP CAGLHGLLRP VMDRLPALPG AQAEVLTRAL ELGAAGGGLA LPASVLNLLA AVGRPVLACV DDVHHLDAPS REALFFAARR LAGEQIVLLF GARAGGTAPE GIPELRLGSL DEDACRLLAD DLAPEGLGAE LRASLIEVAR GNPLALGELV GSLSAAQMAG AAAPPDTLPP GGRLWRAYAD RLARLPAETG NLLLLLAADP DLDMAALVRA AEPACALTLL EPAERAGILV SAAGDRHDFR DPAMRSVVYA EASAARRRAA HRLLASVLDH DHQRLRRAWH RAVSLDGPGD RLADELAAAA SAGSTGSRGG YPAPWLAFER AAELTARGDV KAARLAAAAH RAWHAGLPQR ARSLLTRLCS LTVSEETRGQ AELIRGSLEL RSGKTGSARD ELLSAAGWLL DRDRGRAVRA LLRASEASYL AGDSSRFLAI ARQAAALRRP DDPAATQLMF EYLAGIAATF RGRHREAADP LRRVLELAPS VGNPSVLVWA GVASLLLGDD VQALRLSTRA VEAARVRGAV SAVPQVLEFM IQTEIWMGRY ASVTANAVEG LRLAQESGQP NSAGQHLAWL ALTSAVEGDE ETCRIRAGGA IELAGAHGLG VAGALGNWAL AHLDLAAGRH AGAAKRLRAT ARPDGTNGHL VVRVMATPHL VEAAVRTGEH EQARAALRVL DRWAGSTRSP DRLALAARCH ALLAAPGEAE ERFRDALDLH HQGLCEFETA RTQLLFGSVL RRNRRPGAAR EHLHSALETF ERSGARLWTE QARAELRGAG EAVRSRGHKA AEKLTAQQFQ IARIVADGAT NREVAARLYL SPRTVEHHLR NIFAKLDIRS RVELVRLLS
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