| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4955 |
|---|
| Symbol | |
|---|
| ID | 8668249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 5481995 |
|---|
| End bp | 5482741 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, GntR family |
|---|
| Protein accession | YP_003340503 |
|---|
| Protein GI | 271966307 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.203243 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGTA CGCCCCGCTA CCGCGCCATC GCCGACGACC TGACCCACAA GATCAAGTCG
GGCCACTACC GCGCGGGCGA GGCGTTGCCC GCGCAGCGTG AGCTCAGCGC CTTCTACGGC
GTGACGATGA TGACGCTGCG GCAGGCGTTG CAGGTCCTCA GCGGCGAGGG TCTGATCGTC
CAGCGGGCCG GCCGCGGCAC TTATGTGACG CAGGCCAGCG CGGAGTACCC CCTCGACACG
CTGCGCAGTC TCGGCGACGA CCTACGCAGG CAGGGTTACC CCCTGCGGAC CGAGGTGCTG
TCGGCCGCGA TCCGGCAGGC CCCGCGCTCG CTCACCCGGC TGCTGGGCGA CGCGCCGGCA
GACCGCCGGG CCCTCCGGCT GGCACGCGTA CGGCATCTGC TGGGCCGGCC CGCCGTCCAC
CAGATCTCCT GGATCGTCGA GCCGTACGCC TCGGCGATCA AGGGGGCCGA TTTCACCGAG
ACCCCGCTGT ACACCGCGCT CGCCGACGTC GGCGCGCGAG TGCACCGGGC GACCGAACGG
ATCAGGCCGG CCCTGCTCAC CGCCCCGGTC GCGGCGCGGC TGCAGCACCC GGCGGGCAGC
CCGGTCTTCG TCAGCGAACG GGCGACCTAT GACGACCAGG GCGCCCTGGT CGTCATAGAC
CACGCCACGA TCCTCGGCGA GTGGATGGAG ATCAGGGCCG AGCGCAAGGC CACGGACCTG
TCGCTGCACT GGGTCTCCCA GCGCTGA
|
|---|
| Protein sequence | MSSTPRYRAI ADDLTHKIKS GHYRAGEALP AQRELSAFYG VTMMTLRQAL QVLSGEGLIV
QRAGRGTYVT QASAEYPLDT LRSLGDDLRR QGYPLRTEVL SAAIRQAPRS LTRLLGDAPA
DRRALRLARV RHLLGRPAVH QISWIVEPYA SAIKGADFTE TPLYTALADV GARVHRATER
IRPALLTAPV AARLQHPAGS PVFVSERATY DDQGALVVID HATILGEWME IRAERKATDL
SLHWVSQR
|
|---|
| |