Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4447 |
Symbol | |
ID | 8667741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4961878 |
End bp | 4962771 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003340060 |
Protein GI | 271965864 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000015359 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00108803 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGATGTGA TCGCTGATCT TCTGGATGGG GTCCGGGCGC GGGGCGGGGT GTTCGGCCGT CCGCCTGCCT GTCCCCCGTG GTCGCTGCGG TTCGTGGCGC CGGGCCGGCT GTGGCTGGCG ACGATGGTCG CCGGCCGGGC CTGGGTGGTC GCGGCCGGCG GCGGGCCGCG CGCGCTCGGG CCGGGCGATG TGGTGCTGGC GCGCGGCGAA AGGCCGTTCG TGATCGCCGA TCCGCCGCAG ACCCCGCCGC AGATCGTCGT GCACGGCGAC GAGTGCCGGG GCGAGTTCGG CGCGGGCGGT GGGGCTCAGG GTGGGGCGCT GCTGGTGACC GGCGCCTGCC GGTTGGGCGG GGAGCTGCCG GGGCGGCTGC TGGCCGTACT GCCCGATCTG CTGGTGGTGC CGGGCGGGGA CGTGCGGCTG GCGCCGGTGC TGGAGCTGGT GGGCGCGGAG GCGGCCGGGG TGGCGCCGGG CCGTCAGGTG GTGCTGGAGC GGCTGCTGGA GACGCTGCTG GTGGTGACGG TGCGGGCGTG GTTCGCGCGT GAGGAGGCCG GCGCGCCGCT GTGGTACACG GCTCTGGAGG ATCCGCGGAT CGGGCGGGTG CTGCGGATGA TCCATGCCGC TCCGGCGTCG GGCTGGACGG TGGTGTCGCT GGCCGGGGCG GCGGGGATGT CGCGGGCGGC GTTCGCGCGC AGGTTCACCG CGCTGGTGGG GCGGCCTCCG CTGGCGTATG TGACGGAGTG GCGGATGGCG CTGGCGGCCG AGCTGCTGGC GCGGCCGGGT ACGACGGTGG CGGTGGCGGC CCGTCAGGTG GGCTATGCCG ACGCGTTCGG CTTCAGCGCG GCCTTCAAGC GGGTGCGCGG GGTGAGTCCG GGTGCGGTGC GGGCAGGCGG GTGA
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Protein sequence | MDVIADLLDG VRARGGVFGR PPACPPWSLR FVAPGRLWLA TMVAGRAWVV AAGGGPRALG PGDVVLARGE RPFVIADPPQ TPPQIVVHGD ECRGEFGAGG GAQGGALLVT GACRLGGELP GRLLAVLPDL LVVPGGDVRL APVLELVGAE AAGVAPGRQV VLERLLETLL VVTVRAWFAR EEAGAPLWYT ALEDPRIGRV LRMIHAAPAS GWTVVSLAGA AGMSRAAFAR RFTALVGRPP LAYVTEWRMA LAAELLARPG TTVAVAARQV GYADAFGFSA AFKRVRGVSP GAVRAGG
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