Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_2343 |
Symbol | |
ID | 8665625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 2528064 |
End bp | 2529002 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | periplasmic solute binding protein |
Protein accession | YP_003338066 |
Protein GI | 271963870 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.04012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATGC GTGGCGCGGG TCTGCTTGCT CTCACGACCG TTCTCGCCAC CACCGCCGCC TGCGGTTCCG GCTCAGCCGA CTCCGCCCGG CCGGGCGGTG CGCCGGGAGG CAGGACCGAC GTCACCGCGG CCTTGTATCC GCTGCAGTGG CTGGCCGAGC GGGTGGGCGG CCCCGACGTC GCCGTCACGG GCCTGACCAA GCCAGGCGTC GAGCCGCACG ATCTGGAGCT GACGCCCGTC CAGGTGGCCG GGCTGGAGAA GACCGCCCTG GTCGCCTATA TCAAGGGCGT GCAGCCCGCC GTGGACGAGG CGGTCGAGCA GCACGCCGCC GACCGGGGCT TCGACGCGGC GGCAGCGGTC AAGACCCTCC CGGCGGTCGC CGGCGAGGAG GAGCACGCGG GTGAGGAGGA GCACGGCCAC GAGGTCGCCT ACGACCCGCA CATCTGGCTC GACCCGTCCC GTTTCGCGAC CGTCGCGACC ATGCTCGGCG ACAAGCTCGC CGCCGCCGAC CCGGCGCACG CCCAGGGCTA CAAGGACCGC GCCGCCAAGA CCGCCGCCGA CCTCGGCGCC CTGGACGGCG AGCTGACGCG GGGGCTGAGC AAGTGCGCCT CCACGGCCAT CGTCACCAGC CACGGCGCGT TCGGCTACCT CGCCGACCGC TACAAGCTCC GCCAGATCGG GATCAGCGGC CTCGACCCGG ACGCCGAGCC CTCCCCCGCC CGGCTGGCCG AAGTGGCGAA AGTGTCCAAG CAGGAGAAAG TGACTACGAT TTTCACCGAG ACCCTCGTCA GCCCCAAGGT CGCCGAGGTG CTCGCCCAGG AGGTCGGCGC CAAGACCGCG GTCCTGGACC CGGTCGAGAG CCAGCCGGCG AGCGGCGACT ACCTGTCCGC CATGCGCCAG AACCTCACCG CACTTCAGGC GGCACTCAGC TGCTCGTAA
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Protein sequence | MRMRGAGLLA LTTVLATTAA CGSGSADSAR PGGAPGGRTD VTAALYPLQW LAERVGGPDV AVTGLTKPGV EPHDLELTPV QVAGLEKTAL VAYIKGVQPA VDEAVEQHAA DRGFDAAAAV KTLPAVAGEE EHAGEEEHGH EVAYDPHIWL DPSRFATVAT MLGDKLAAAD PAHAQGYKDR AAKTAADLGA LDGELTRGLS KCASTAIVTS HGAFGYLADR YKLRQIGISG LDPDAEPSPA RLAEVAKVSK QEKVTTIFTE TLVSPKVAEV LAQEVGAKTA VLDPVESQPA SGDYLSAMRQ NLTALQAALS CS
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